RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TBX21Q9UL17 535 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 LRRC42Q9Y546 428 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 RAI2Q9Y5P3 530 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 TYW5A2RUC4 315 aaKnown RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 RGSL1A5PLK6 1076 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 CARNS1A5YM72 827 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 TMEM233B4DJY2 109 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 C1RP00736 705 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 HNRNPLP14866 589 aaKnown RBP eCLIP15.67■□□□□ 0.1
MKS1-204ENST00000537529 SMAD3P84022 425 aaKnown RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 NFKB2Q00653 900 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 DNAJB7Q7Z6W7 309 aaPredicted RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 SNX32Q86XE0 403 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 DEFB107AQ8IZN7 70 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 HJURPQ8NCD3 748 aaPredicted RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 RP9Q8TA86 221 aaKnown RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 DTX3LQ8TDB6 740 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 TOP1MTQ969P6 601 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 L3HYPDHQ96EM0 354 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 MAELQ96JY0 434 aaKnown RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 NSMCE3Q96MG7 304 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 CATSPER2Q96P56 530 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 SPG21Q9NZD8 308 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 CDH22Q9UJ99 828 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 H0Y626 953 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 SDHDO14521 159 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 NVLO15381 856 aaKnown RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 TBL1XO60907 577 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 TBX10O75333 385 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 FKBP6O75344 327 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 ZMPSTE24O75844 475 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 TMCC1O94876 653 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 PRLP01236 227 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 JUNP05412 331 aaKnown RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 CD1DP15813 335 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 IMPDH1P20839 514 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 SP100P23497 879 aaPredicted RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 PSMA3P25788 255 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 PLK1P53350 603 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 AP2B1P63010 937 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 TBL3Q12788 808 aaKnown RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 PDAP1Q13442 181 aaKnown RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 CMPK2Q5EBM0 449 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 PGM2L1Q6PCE3 622 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 LRRC74BQ6ZQY2 392 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 DDX53Q86TM3 631 aaKnown RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 ISCA2Q86U28 154 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 CUZD1Q86UP6 607 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 TCEAL8Q8IYN2 117 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 CARNMT1Q8N4J0 409 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 OR4K2Q8NGD2 314 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 ZNF689Q96CS4 500 aaPredicted RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 PHF21BQ96EK2 531 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 TCF12Q99081 682 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 CCDC68Q9H2F9 335 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 MRGBPQ9NV56 204 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 MAFFQ9ULX9 164 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 G3BP2Q9UN86 482 aaKnown RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 INSL5Q9Y5Q6 135 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 ABHD14A-ACY1A0A1B0GW23 586 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 VGLL3A8MV65 326 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 F11P03951 625 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 ZNF37AP17032 561 aaPredicted RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 LPOP22079 712 aaPredicted RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 EPHB1P54762 984 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 ARF5P84085 180 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 CYLC2Q14093 348 aaPredicted RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 MUM1Q2TAK8 710 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 C16orf89Q6UX73 402 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 ITIH5Q86UX2 942 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 CEP70Q8NHQ1 597 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 N4BP2L2Q92802 583 aaPredicted RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 ZFRQ96KR1 1074 aaKnown RBP15.66■□□□□ 0.1
MKS1-204ENST00000537529 TMEM39AQ9NV64 488 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 VPS9D1Q9Y2B5 631 aa15.66■□□□□ 0.1
MKS1-204ENST00000537529 UBA6A0AVT1 1052 aaPredicted RBP15.65■□□□□ 0.1
MKS1-204ENST00000537529 PFDN6O15212 129 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 NDUFS3O75489 264 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 RHOBTB1O94844 696 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 LUC7L3O95232 432 aaKnown RBP15.65■□□□□ 0.1
MKS1-204ENST00000537529 CDC25CP30307 473 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 TIAL1Q01085 375 aaKnown RBP eCLIP15.65■□□□□ 0.1
MKS1-204ENST00000537529 PEX6Q13608 980 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 C1orf53Q5VUE5 145 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 FAM117BQ6P1L5 589 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 RAB44Q7Z6P3 723 aaPredicted RBP15.65■□□□□ 0.1
MKS1-204ENST00000537529 SPNS2Q8IVW8 549 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 CMTR2Q8IYT2 770 aaKnown RBP15.65■□□□□ 0.1
MKS1-204ENST00000537529 PPFIBP2Q8ND30 876 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 MDGA1Q8NFP4 955 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 JADE3Q92613 823 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 PTERQ96BW5 349 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 NAF1Q96HR8 494 aaKnown RBP15.65■□□□□ 0.1
MKS1-204ENST00000537529 GSTO2Q9H4Y5 243 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 SYTL2Q9HCH5 934 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 ATP11BQ9Y2G3 1177 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 PCDHGC4Q9Y5F7 938 aa15.65■□□□□ 0.1
MKS1-204ENST00000537529 SNAP91O60641 907 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 SKAP2O75563 359 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 PDE5AO76074 875 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms