RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SCCPDHQ8NBX0 429 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 KLHDC9Q8NEP7 349 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 ZNF570Q96NI8 536 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 MOV10L1Q9BXT6 1211 aaKnown RBP4.89□□□□□ -1.63
CCDC7-208ENST00000537047 OR2W1Q9Y3N9 320 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 STON1Q9Y6Q2 735 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 COL2A1P02458 1487 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-208ENST00000537047 BCAT2O15382 392 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-208ENST00000537047 KRT2P35908 639 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 TAF5Q15542 800 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 CCDC96Q2M329 555 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 TAOK1Q7L7X3 1001 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 SLC35F3Q8IY50 421 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
CCDC7-208ENST00000537047 MYCT1Q8N699 235 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 SIN3AQ96ST3 1273 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 CMKLR1Q99788 373 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 BABAM1Q9NWV8 329 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 HCFC1R1Q9NWW0 138 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 PEMTQ9UBM1 199 aa4.88□□□□□ -1.63
CCDC7-208ENST00000537047 DVL1O14640 695 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 AGAP20933 346 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 CLCNKAP51800 687 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 EFNA5P52803 228 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 DVL1P1P54792 670 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-208ENST00000537047 PMP22Q01453 160 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 PRKG1Q13976 671 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 C2orf68Q2NKX9 166 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 ZNF876PQ49A33 203 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 SRBD1Q8N5C6 995 aaKnown RBP4.87□□□□□ -1.63
CCDC7-208ENST00000537047 OR10V1Q8NGI7 309 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 SH3KBP1Q96B97 665 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 LGALS12Q96DT0 336 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 COG8Q96MW5 612 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 EYA3Q99504 573 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 ALKBH4Q9NXW9 302 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-208ENST00000537047 SUFUQ9UMX1 484 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 CARD8Q9Y2G2 431 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 RIPOR2Q9Y4F9 1068 aa4.87□□□□□ -1.63
CCDC7-208ENST00000537047 CRLF1O75462 422 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 TUBBP07437 444 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 CD58P19256 250 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 GNL1P36915 607 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-208ENST00000537047 TUBB4BP68371 445 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 PPIGQ13427 754 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC7-208ENST00000537047 SERTAD4-AS1Q5TG53 156 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 HERC6Q8IVU3 1022 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
CCDC7-208ENST00000537047 RNF113BQ8IZP6 322 aaKnown RBP4.86□□□□□ -1.63
CCDC7-208ENST00000537047 PLD5Q8N7P1 536 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 MAPK1IP1LQ8NDC0 245 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 RUFY2Q8WXA3 655 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 FBXL8Q96CD0 374 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 PAGR1Q9BTK6 254 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 HEMGNQ9BXL5 484 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 TTYH1Q9H313 450 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-208ENST00000537047 TAGLN3Q9UI15 199 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 KCNK7Q9Y2U2 307 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 AMDHD2Q9Y303 409 aa4.86□□□□□ -1.63
CCDC7-208ENST00000537047 AKR1B15C9JRZ8 316 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-208ENST00000537047 MMP2P08253 660 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 USP8P40818 1118 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 HSD17B4P51659 736 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 DRG2P55039 364 aaKnown RBP4.85□□□□□ -1.63
CCDC7-208ENST00000537047 HNRNPH2P55795 449 aaKnown RBP4.85□□□□□ -1.63
CCDC7-208ENST00000537047 SLC45A4Q5BKX6 768 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 CEACAM20Q6UY09 585 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 ASB18Q6ZVZ8 466 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 SPICE1Q8N0Z3 855 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 TRAPPC12Q8WVT3 735 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 CD180Q99467 661 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 LRRC1Q9BTT6 524 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 FSD1Q9BTV5 496 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 POLR3CQ9BUI4 534 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-208ENST00000537047 PHF7Q9BWX1 381 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-208ENST00000537047 ZNF700Q9H0M5 742 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 MAGEE1Q9HCI5 957 aa4.85□□□□□ -1.63
CCDC7-208ENST00000537047 LSM4Q9Y4Z0 139 aaKnown RBP4.85□□□□□ -1.63
CCDC7-208ENST00000537047 PLIN1O60240 522 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 TDGQ13569 410 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 SIRPB2Q5JXA9 342 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 PDSS1Q5T2R2 415 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 ZC2HC1BQ5TFG8 222 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 RAD9BQ6WBX8 426 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 TDRPQ86YL5 185 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 LSM14AQ8ND56 463 aaKnown RBP4.84□□□□□ -1.63
CCDC7-208ENST00000537047 ZNF248Q8NDW4 579 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 HMGCLL1Q8TB92 370 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 SPPL3Q8TCT6 385 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 PPM1EQ8WY54 764 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 SLC39A13Q96H72 371 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 ZNF599Q96NL3 588 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 MMP25Q9NPA2 562 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 RASSF1Q9NS23 344 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 IL1RAPL1Q9NZN1 696 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 KIAA1456Q9P272 454 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 SMAD5-AS1Q9Y6J3 95 aa4.84□□□□□ -1.63
CCDC7-208ENST00000537047 CNPP09543 421 aaKnown RBP4.83□□□□□ -1.64
CCDC7-208ENST00000537047 KRT5P13647 590 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms