RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 RPS6KL1Q9Y6S9 549 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 COL4A2P08572 1712 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MYO10Q9HD67 2058 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 VCANP13611 3396 aa13.01□□□□□ -0.33
CDK5RAP3-202ENST00000536708 H0Y3Z8 333 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 K7ERQ8 282 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KDELR3O43731 214 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ITM2AO43736 263 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZMPSTE24O75844 475 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KLHL2O95198 593 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ENO1P06733 434 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PDHA1P08559 390 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 LAMP2P13473 410 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SPRP35270 261 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 VHLP40337 213 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CTSOP43234 321 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NPY2RP49146 381 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 STK19P49842 368 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MXRA7P84157 204 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PDE1BQ01064 536 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DSC2Q02487 901 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SLC34A1Q06495 639 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MPP7Q5T2T1 576 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TMCO4Q5TGY1 634 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MARC1Q5VT66 337 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZCCHC23Q6ZST2 131 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RASSF3Q86WH2 238 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PPP1R14CQ8TAE6 165 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 WDR60Q8WVS4 1066 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 LMLNQ96KR4 655 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GUCD1Q96NT3 240 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 APOL2Q9BQE5 337 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TRPV4Q9HBA0 871 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZFP14Q9HCL3 533 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 HPS4Q9NQG7 708 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 BFARQ9NZS9 450 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SLC17A6Q9P2U8 582 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CD207Q9UJ71 328 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DNAJC16Q9Y2G8 782 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ATG2BQ96BY7 2078 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZCWPW2A0A1B0GU75 182 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 AP3B1O00203 1094 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ERVK-10P10266 1014 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KITP10721 976 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ADH5P11766 374 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 BMP1P13497 986 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TYK2P29597 1187 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MTHFRP42898 656 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 LIMK2P53671 638 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 HNRNPDQ14103 355 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZNF235Q14590 738 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SKIV2LQ15477 1246 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GAB4Q2WGN9 574 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PLEKHG6Q3KR16 790 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 LRRC49Q8IUZ0 686 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SERBP1Q8NC51 408 aaKnown RBP eCLIP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 OR52K1Q8NGK4 314 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FIBINQ8TAL6 211 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SORT1Q99523 831 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 EBF4Q9BQW3 602 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MCMBPQ9BTE3 642 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GLOD4Q9HC38 313 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GTSE1Q9NYZ3 720 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TMEM216Q9P0N5 145 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TXNDC16Q9P2K2 825 aa13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 UBA2Q9UBT2 640 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MARCOQ9UEW3 520 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PRR5-ARHGAP8B1AHC4 643 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NVLO15381 856 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CACNG3O60359 315 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MPOP05164 745 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SERPINB8P50452 374 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CSE1LP55060 971 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ARHGAP8P85298 464 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KLC1Q07866 573 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ITKQ08881 620 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RCN1Q15293 331 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MUM1Q2TAK8 710 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TRMT5Q32P41 509 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ANKRD20A4Q4UJ75 823 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PITRM1Q5JRX3 1037 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 AP1ARQ63HQ0 302 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TMEM215Q68D42 235 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ITPRIPL1Q6GPH6 555 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 IRGCQ6NXR0 463 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CLEC14AQ86T13 490 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 C10orf107Q8IVU9 208 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SFTPA1Q8IWL2 248 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SCUBE1Q8IWY4 988 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TEX26Q8N6G2 289 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SUSD6Q92537 303 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 OTUB2Q96DC9 234 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RPL10LQ96L21 214 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NSMCE3Q96MG7 304 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RILPQ96NA2 401 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TSC22D3Q99576 134 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms