RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TBC1D3BA6NDS4 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3FA6NER0 549 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 AGAP5A6NIR3 686 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 C3orf70A6NLC5 250 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 LOC730098B7Z3J9 87 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3LB9A6J9 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 KIR2DS3K7RE56 304 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 ANP32CO43423 234 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 ACTL6BO94805 426 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 LARGE1O95461 756 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 MMP3P08254 477 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 ITGA2BP08514 1039 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3HP0C7X1 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 AVPR2P30518 371 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 SIGLEC14Q08ET2 396 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 IKQ13123 557 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3GQ6DHY5 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3CQ6IPX1 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 RTL10Q7L3V2 364 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 MDGA2Q7Z553 956 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3Q8IZP1 549 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 MMP21Q8N119 569 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 PAQR4Q8N4S7 273 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 ADPRHL1Q8NDY3 354 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 DBF4BQ8NFT6 615 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 AFG1LQ8WV93 481 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 KAT2AQ92830 837 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 FRAT1Q92837 279 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 NAF1Q96HR8 494 aaKnown RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 YME1L1Q96TA2 773 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 SORBS1Q9BX66 1292 aaKnown RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 BOLA2Q9H3K6 86 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 SEMA4BQ9NPR2 832 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 PRDM8Q9NQV8 689 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 THSD1Q9NS62 852 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 POT1Q9NUX5 634 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 PAG1Q9NWQ8 432 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 HDAC6Q9UBN7 1215 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 CD207Q9UJ71 328 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 CCPG1Q9ULG6 757 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 COPG1Q9Y678 874 aaKnown RBP5.82□□□□□ -1.48
CLIP1-207ENST00000536634 KIAA1671Q9BY89 1806 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 KIAA1217Q5T5P2 1943 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 CEP295Q9C0D2 2601 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 MYO10Q9HD67 2058 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 RAD50Q92878 1312 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 HEXIM1O94992 359 aaKnown RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 NTN1O95631 604 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 ICAM1P05362 532 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 ZNF286BP0CG31 522 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 MCCP23508 829 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 CTNNB1P35222 781 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 NBL1P41271 181 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 SLC1A4P43007 532 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 RRP1P56182 461 aaKnown RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 LINC00205P59089 165 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 ARHGAP1Q07960 439 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 CAMK1Q14012 370 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 SMTNL2Q2TAL5 461 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 TUBB8Q3ZCM7 444 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 SBK1Q52WX2 424 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 ATPAF1Q5TC12 328 aaPredicted RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 ASPHD1Q5U4P2 390 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 KIAA1324Q6UXG2 1013 aaKnown RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 ADGRD2Q7Z7M1 963 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 FAM160B2Q86V87 743 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 SLC44A2Q8IWA5 706 aaPredicted RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 DDIASQ8IXT1 998 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 FAM47BQ8NA70 645 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 C9orf106Q8NAJ2 232 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 SMRP1Q8NCR6 262 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 STT3BQ8TCJ2 826 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 SCFD2Q8WU76 684 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 TOP1MTQ969P6 601 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 PABPC3Q9H361 631 aaKnown RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 LIN7CQ9NUP9 197 aaKnown RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 DACT1Q9NYF0 836 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 ADD3Q9UEY8 706 aaKnown RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 PCDHA12Q9UN75 941 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 SLC8A2Q9UPR5 921 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 MYH7BA7E2Y1 1941 aa5.81□□□□□ -1.48
CLIP1-207ENST00000536634 FASNP49327 2511 aaKnown RBP5.81□□□□□ -1.48
CLIP1-207ENST00000536634 CXorf65A6NEN9 183 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 MBD3L5A6NJ08 208 aaPredicted RBP5.8□□□□□ -1.48
CLIP1-207ENST00000536634 C5orf67F2Z3F1 127 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 NMT2O60551 498 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 ATG13O75143 517 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 EPN2O95208 641 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 CSTBP04080 98 aaKnown RBP5.8□□□□□ -1.48
CLIP1-207ENST00000536634 DNAJB1P25685 340 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 CALML3P27482 149 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 SLC16A2P36021 539 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 RPS6P62753 249 aaKnown RBP5.8□□□□□ -1.48
CLIP1-207ENST00000536634 AP2B1P63010 937 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 TRIM14Q14142 442 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 MORC3Q14149 939 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 TWIST1Q15672 202 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 GALNTL6Q49A17 601 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 TTC22Q5TAA0 569 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms