RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KIF5AQ12840 1032 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 ZNF211Q13398 564 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 MTM1Q13496 603 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 PTK2BQ14289 1009 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 GALNT3Q14435 633 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 CDKN3Q16667 212 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 ALG11Q2TAA5 492 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 TEX44Q53QW1 395 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 PNCKQ6P2M8 343 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 ENPP7Q6UWV6 458 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 DHRS13Q6UX07 377 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 Q6ZVL8 140 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 OR4C6Q8NH72 309 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 P3H4Q92791 437 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 TADA1Q96BN2 335 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 NUS1Q96E22 293 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 IMP4Q96G21 291 aaKnown RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 PDXPQ96GD0 296 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 CALR3Q96L12 384 aaKnown RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 QKIQ96PU8 341 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 TRIB3Q96RU7 358 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 LRRC61Q9BV99 259 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 OSBPL8Q9BZF1 889 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 CLPBQ9H078 707 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 GLOD4Q9HC38 313 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 APOBEC3BQ9UH17 382 aaKnown RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 CD84Q9UIB8 345 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 APOBEC2Q9Y235 224 aaKnown RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 U3KQA8 63 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 IGF2RP11717 2491 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 LRRK1Q38SD2 2015 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 LAMA5O15230 3695 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 CCDC66A2RUB6 948 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 CAPN8A6NHC0 703 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 TOR1BO14657 336 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
PRKDC-206ENST00000536429 AQP9O43315 295 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 CLDN7O95471 211 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 SOD1P00441 154 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 TRIM23P36406 574 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 EPHB1P54762 984 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 RWDD2BP57060 319 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 GSDMDP57764 484 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 PPARDQ03181 441 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 PCSK7Q16549 785 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 DEFB133Q30KQ1 61 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 PRRT3Q5FWE3 981 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 FAXCQ5TGI0 409 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 ESRP1Q6NXG1 681 aaKnown RBP13.16□□□□□ -0.3
PRKDC-206ENST00000536429 PEX26Q7Z412 305 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 HID1Q8IV36 788 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
PRKDC-206ENST00000536429 OR1E3Q8WZA6 343 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 SCAMP4Q969E2 229 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 TEKT5Q96M29 485 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 SLC25A51Q9H1U9 297 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 MRPL40Q9NQ50 206 aaKnown RBP13.16□□□□□ -0.3
PRKDC-206ENST00000536429 UBP1Q9NZI7 540 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 AMFRQ9UKV5 643 aa13.16□□□□□ -0.3
PRKDC-206ENST00000536429 CELSR3Q9NYQ7 3312 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 FAM149AA5PLN7 773 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 C1QTNF9BB2RNN3 333 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 H3BM21 787 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 PSMD11O00231 422 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 APOC2P02655 101 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 PIRTP0C851 137 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 C1QTNF9P0C862 333 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 TSHRP16473 764 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 CKMT2P17540 419 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 NFKB1P19838 968 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 RBL1P28749 1068 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 PTPN7P35236 360 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 STC1P52823 247 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 KIAA1024LP59773 190 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 SRP54P61011 504 aaKnown RBP13.15□□□□□ -0.3
PRKDC-206ENST00000536429 COPS2P61201 443 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 OTUD4Q01804 1114 aaKnown RBP13.15□□□□□ -0.3
PRKDC-206ENST00000536429 ARHGEF7Q14155 803 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 NOMO1Q15155 1222 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 BZW1Q7L1Q6 419 aaKnown RBP13.15□□□□□ -0.3
PRKDC-206ENST00000536429 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 HEATR4Q86WZ0 1026 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 ZNF567Q8N184 647 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 GATA6Q92908 595 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 EID2BQ96D98 161 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 APOLD1Q96LR9 279 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 WDR92Q96MX6 357 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 ABCG8Q9H221 673 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 WDR26Q9H7D7 661 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 NLGN3Q9NZ94 848 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms