RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 PLEKHG7Q6ZR37 379 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 NEK10Q6ZWH5 1172 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 FKBP9P1Q75LS8 142 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 PRSS48Q7RTY5 328 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 DSG4Q86SJ6 1040 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 ITIH5Q86UX2 942 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 ZBTB46Q86UZ6 589 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 NT5DC4Q86YG4 428 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 MMAAQ8IVH4 418 aaKnown RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 SCUBE3Q8IX30 993 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 AFAP1L2Q8N4X5 818 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 TMCO5AQ8N6Q1 288 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 CCNYL1Q8N7R7 359 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 C12orf29Q8N999 325 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 NETO2Q8NC67 525 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 CHDHQ8NE62 594 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 FLAD1Q8NFF5 587 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 ZFP90Q8TF47 636 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 PHF10Q8WUB8 498 aaKnown RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 HEXDCQ8WVB3 486 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 OSCP1Q8WVF1 389 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 SGCDQ92629 289 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 HPS1Q92902 700 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 PPWD1Q96BP3 646 aaKnown RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 L3HYPDHQ96EM0 354 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 CCDC97Q96F63 343 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 HPDLQ96IR7 371 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 C3orf30Q96M34 536 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 TSNARE1Q96NA8 513 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 RDH12Q96NR8 316 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 MUS81Q96NY9 551 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 TSGA13Q96PP4 275 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 MBOAT4Q96T53 435 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 NPY6RQ99463 290 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 OMDQ99983 421 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 MRPL45Q9BRJ2 306 aaKnown RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 SLC39A3Q9BRY0 314 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 FEM1AQ9BSK4 669 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 MTG1Q9BT17 334 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 HERC2P3Q9BVR0 1158 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 ALOXE3Q9BYJ1 711 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 TMEM39BQ9GZU3 492 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 RPAP3Q9H6T3 665 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 SIAEQ9HAT2 523 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 FBRSL1Q9HCM7 1045 aaKnown RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 HMG20AQ9NP66 347 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 CHRAC1Q9NRG0 131 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 GTSE1Q9NYZ3 720 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 USE1Q9NZ43 259 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 MTRRQ9UBK8 725 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 KLQ9UEF7 1012 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 VPS51Q9UID3 782 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 ANAPC2Q9UJX6 822 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 TRHDEQ9UKU6 1024 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 ZNF214Q9UL59 606 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 PCDHGB1Q9Y5G3 927 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 ST14Q9Y5Y6 855 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
CPSF7-215ENST00000536145 TLL2Q9Y6L7 1015 aa6.94□□□□□ -1.3
CPSF7-215ENST00000536145 COL4A4P53420 1690 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 ZSWIM8A7E2V4 1837 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 COL11A1P12107 1806 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TSC2P49815 1807 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 A0A0J9YYE9 177 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 RNF103-CHMP3A0A140T963 221 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TTC34A8MYJ7 566 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 UBXN8O00124 270 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 AP3B1O00203 1094 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 LSM1O15116 133 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 B4GAT1O43505 415 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 GPC4O75487 556 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 MYO1DO94832 1006 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 FGF4P08620 206 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 PRR35P0CG20 571 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 THRBP10828 461 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 NFKB1P19838 968 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 EDNRBP24530 442 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 YWHAQP27348 245 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TKTP29401 623 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 CD40LGP29965 261 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 HCAR3P49019 387 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 ALDH3A2P51648 485 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 STAT5BP51692 787 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 KPNA2P52292 529 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 SNX16P57768 344 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 PITX1P78337 314 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 RBP5P82980 135 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TNFAIP2Q03169 654 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 OCA2Q04671 838 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 POU5F1BQ06416 359 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 BFSP2Q13515 415 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 SEPT6Q14141 434 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 ZNF460Q14592 562 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 ACOX1Q15067 660 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 PLCL1Q15111 1095 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 MAPRE1Q15691 268 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 HIST2H2ACQ16777 129 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 UGP2Q16851 508 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms