RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 CDCA5Q96FF9 252 aa4.9□□□□□ -1.63
CCDC7-207ENST00000535327 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.63
CCDC7-207ENST00000535327 BARHL1Q9BZE3 327 aa4.9□□□□□ -1.63
CCDC7-207ENST00000535327 PCDH9Q9HC56 1237 aa4.9□□□□□ -1.63
CCDC7-207ENST00000535327 SNTG1Q9NSN8 517 aa4.9□□□□□ -1.63
CCDC7-207ENST00000535327 MCM9Q9NXL9 1143 aa4.9□□□□□ -1.63
CCDC7-207ENST00000535327 COMMD10Q9Y6G5 202 aa4.9□□□□□ -1.63
CCDC7-207ENST00000535327 VWA3AA6NCI4 1184 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 PATE4P0C8F1 98 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 CORO1AP31146 461 aaKnown RBP4.89□□□□□ -1.63
CCDC7-207ENST00000535327 CHKAP35790 457 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 GPATCH4Q5T3I0 446 aaKnown RBP4.89□□□□□ -1.63
CCDC7-207ENST00000535327 LCTLQ6UWM7 567 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 GPAT4Q86UL3 456 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 SCCPDHQ8NBX0 429 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 KLHDC9Q8NEP7 349 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 ZNF570Q96NI8 536 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 RPS6KC1Q96S38 1066 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 MOV10L1Q9BXT6 1211 aaKnown RBP4.89□□□□□ -1.63
CCDC7-207ENST00000535327 OR2W1Q9Y3N9 320 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 STON1Q9Y6Q2 735 aa4.89□□□□□ -1.63
CCDC7-207ENST00000535327 BCAT2O15382 392 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-207ENST00000535327 PEX14O75381 377 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 KRT2P35908 639 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 TAF5Q15542 800 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 CCDC96Q2M329 555 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 TAOK1Q7L7X3 1001 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 SLC35F3Q8IY50 421 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
CCDC7-207ENST00000535327 MYCT1Q8N699 235 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 SIN3AQ96ST3 1273 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 CMKLR1Q99788 373 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 BABAM1Q9NWV8 329 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 HCFC1R1Q9NWW0 138 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 PEMTQ9UBM1 199 aa4.88□□□□□ -1.63
CCDC7-207ENST00000535327 DVL1O14640 695 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 AGAP20933 346 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 CLCNKAP51800 687 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 EFNA5P52803 228 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 DVL1P1P54792 670 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-207ENST00000535327 PMP22Q01453 160 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 PRKG1Q13976 671 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 MORC3Q14149 939 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 C2orf68Q2NKX9 166 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 ZNF876PQ49A33 203 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 SRBD1Q8N5C6 995 aaKnown RBP4.87□□□□□ -1.63
CCDC7-207ENST00000535327 OR10V1Q8NGI7 309 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 SH3KBP1Q96B97 665 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 LGALS12Q96DT0 336 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 COG8Q96MW5 612 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 EYA3Q99504 573 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 ALKBH4Q9NXW9 302 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-207ENST00000535327 SUFUQ9UMX1 484 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 CARD8Q9Y2G2 431 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 RIPOR2Q9Y4F9 1068 aa4.87□□□□□ -1.63
CCDC7-207ENST00000535327 CRLF1O75462 422 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 TUBBP07437 444 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 CD58P19256 250 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 GNL1P36915 607 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-207ENST00000535327 TUBB4BP68371 445 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 PPIGQ13427 754 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC7-207ENST00000535327 SERTAD4-AS1Q5TG53 156 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 HERC6Q8IVU3 1022 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
CCDC7-207ENST00000535327 RNF113BQ8IZP6 322 aaKnown RBP4.86□□□□□ -1.63
CCDC7-207ENST00000535327 PLD5Q8N7P1 536 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 MAPK1IP1LQ8NDC0 245 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 RUFY2Q8WXA3 655 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 FBXL8Q96CD0 374 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 PAGR1Q9BTK6 254 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 HEMGNQ9BXL5 484 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 TTYH1Q9H313 450 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-207ENST00000535327 TAGLN3Q9UI15 199 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 KCNK7Q9Y2U2 307 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 AMDHD2Q9Y303 409 aa4.86□□□□□ -1.63
CCDC7-207ENST00000535327 AKR1B15C9JRZ8 316 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-207ENST00000535327 MMP2P08253 660 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 USP8P40818 1118 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 HSD17B4P51659 736 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 DRG2P55039 364 aaKnown RBP4.85□□□□□ -1.63
CCDC7-207ENST00000535327 HNRNPH2P55795 449 aaKnown RBP4.85□□□□□ -1.63
CCDC7-207ENST00000535327 SLC45A4Q5BKX6 768 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 CEACAM20Q6UY09 585 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 ASB18Q6ZVZ8 466 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 SPICE1Q8N0Z3 855 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 TRAPPC12Q8WVT3 735 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 CD180Q99467 661 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 LRRC1Q9BTT6 524 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 FSD1Q9BTV5 496 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 POLR3CQ9BUI4 534 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-207ENST00000535327 PHF7Q9BWX1 381 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-207ENST00000535327 MAGEE1Q9HCI5 957 aa4.85□□□□□ -1.63
CCDC7-207ENST00000535327 LSM4Q9Y4Z0 139 aaKnown RBP4.85□□□□□ -1.63
CCDC7-207ENST00000535327 COL2A1P02458 1487 aaPredicted RBP4.84□□□□□ -1.63
CCDC7-207ENST00000535327 TDGQ13569 410 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 SIRPB2Q5JXA9 342 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 PDSS1Q5T2R2 415 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 ZC2HC1BQ5TFG8 222 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 RAD9BQ6WBX8 426 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms