RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CORO1AP31146 461 aaKnown RBP4.17□□□□□ -1.74
PTPRK-220ENST00000531466 DCTP40126 519 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 CLDN2P57739 230 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 SETQ01105 290 aaPredicted RBP4.17□□□□□ -1.74
PTPRK-220ENST00000531466 EIF2S3LQ2VIR3 472 aaKnown RBP4.17□□□□□ -1.74
PTPRK-220ENST00000531466 LRRC8EQ6NSJ5 796 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 ANKRD54Q6NXT1 300 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 APLFQ8IW19 511 aaPredicted RBP4.17□□□□□ -1.74
PTPRK-220ENST00000531466 CPXM2Q8N436 756 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 STPG4Q8N801 248 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 SCCPDHQ8NBX0 429 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 OR2AK2Q8NG84 335 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 ART5Q96L15 291 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 ZNF570Q96NI8 536 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 NAP1L5Q96NT1 182 aaPredicted RBP4.17□□□□□ -1.74
PTPRK-220ENST00000531466 MXRA8Q9BRK3 442 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 SYT17Q9BSW7 474 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 RPS10P5Q9NQ39 176 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 STX16-NPEPL1H3BU86 382 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 STX16O14662 325 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 WDR1O75083 606 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 ZNF821O75541 412 aaPredicted RBP4.16□□□□□ -1.74
PTPRK-220ENST00000531466 PARNO95453 639 aaKnown RBP4.16□□□□□ -1.74
PTPRK-220ENST00000531466 CENPBP07199 599 aaPredicted RBP4.16□□□□□ -1.74
PTPRK-220ENST00000531466 SLC2A4P14672 509 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 KRT9P35527 623 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 TERF1P54274 439 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 TANGO2Q6ICL3 276 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 ASB18Q6ZVZ8 466 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 MTSS1LQ765P7 747 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 TAOK1Q7L7X3 1001 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 NOXA1Q86UR1 476 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 CERS3Q8IU89 383 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 KIAA2013Q8IYS2 634 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 STAMBPL1Q96FJ0 436 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 TWNKQ96RR1 684 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 NUF2Q9BZD4 464 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 ESRP2Q9H6T0 727 aaKnown RBP4.16□□□□□ -1.74
PTPRK-220ENST00000531466 DDX4Q9NQI0 724 aaKnown RBP4.16□□□□□ -1.74
PTPRK-220ENST00000531466 LRCH1Q9Y2L9 728 aa4.16□□□□□ -1.74
PTPRK-220ENST00000531466 CST5P28325 142 aaPredicted RBP4.15□□□□□ -1.75
PTPRK-220ENST00000531466 DDIT3P35638 169 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 BLKP51451 505 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 YWHAZP63104 245 aaKnown RBP4.15□□□□□ -1.75
PTPRK-220ENST00000531466 TNFAIP2Q03169 654 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 GTF2H2Q13888 395 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 TIGD6Q17RP2 521 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 GTF2H2CQ6P1K8 395 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 DENND1BQ6P3S1 775 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 WDR20Q8TBZ3 569 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 RAB40AQ8WXH6 277 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 CNOT9Q92600 299 aaKnown RBP4.15□□□□□ -1.75
PTPRK-220ENST00000531466 ZNF653Q96CK0 615 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 CMKLR1Q99788 373 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 CLSTN3Q9BQT9 956 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 NLRC4Q9NPP4 1024 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 MAP3K20Q9NYL2 800 aaKnown RBP4.15□□□□□ -1.75
PTPRK-220ENST00000531466 CHPF2Q9P2E5 772 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 CTNNAL1Q9UBT7 734 aa4.15□□□□□ -1.75
PTPRK-220ENST00000531466 C17orf113A0A1B0GUU1 675 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 PABPN1LA6NDY0 278 aaKnown RBP4.14□□□□□ -1.75
PTPRK-220ENST00000531466 CYC1P08574 325 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 PRSS56P0CW18 603 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 EDN2P20800 178 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 PTMSP20962 102 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 GNALP38405 381 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 PDE1BQ01064 536 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 CUL4BQ13620 913 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 HSP90AB2PQ58FF8 381 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 WDR38Q5JTN6 314 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 FAM53AQ6NSI3 398 aaPredicted RBP4.14□□□□□ -1.75
PTPRK-220ENST00000531466 P2RY8Q86VZ1 359 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 ANKRD52Q8NB46 1076 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 TMEM190Q8WZ59 177 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 PCYT2Q99447 389 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.14□□□□□ -1.75
PTPRK-220ENST00000531466 TRIM15Q9C019 465 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 WDR12Q9GZL7 423 aaKnown RBP4.14□□□□□ -1.75
PTPRK-220ENST00000531466 TFB2MQ9H5Q4 396 aaKnown RBP4.14□□□□□ -1.75
PTPRK-220ENST00000531466 GEMIN8Q9NWZ8 242 aaKnown RBP4.14□□□□□ -1.75
PTPRK-220ENST00000531466 SRP68Q9UHB9 627 aaKnown RBP4.14□□□□□ -1.75
PTPRK-220ENST00000531466 DLGAP4Q9Y2H0 992 aa4.14□□□□□ -1.75
PTPRK-220ENST00000531466 A0A0J9YWU9 116 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 GOLGA6L9A6NEM1 432 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 ETFAP13804 333 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 GNB3P16520 340 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 HNRNPH2P55795 449 aaKnown RBP4.13□□□□□ -1.75
PTPRK-220ENST00000531466 CHRNDQ07001 517 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 C17orf99Q6UX52 265 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 TRIM58Q8NG06 486 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 CEP70Q8NHQ1 597 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 LINC00479Q96M42 142 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 SIN3AQ96ST3 1273 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 MTERF1Q99551 399 aaKnown RBP4.13□□□□□ -1.75
PTPRK-220ENST00000531466 KCNN2Q9H2S1 579 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 MKKSQ9NPJ1 570 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-220ENST00000531466 CLSPNQ9HAW4 1339 aa4.13□□□□□ -1.75
PTPRK-220ENST00000531466 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 PER2O15055 1255 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms