RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 BBS2Q9BXC9 721 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 NKX2-4Q9H2Z4 354 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 IGFLR1Q9H665 355 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 CCDC134Q9H6E4 229 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 ARNT2Q9HBZ2 717 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 SNX15Q9NRS6 342 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
SOX6-211ENST00000528429 MTO1Q9Y2Z2 717 aaKnown RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 MAGED1Q9Y5V3 778 aaPredicted RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 WNT6Q9Y6F9 365 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 LOC285095A0A1B0GVY8 99 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 OR51F1A6NGY5 319 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 CCDC85CA6NKD9 419 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 SRRM3A6NNA2 597 aaPredicted RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 GFRA2O00451 464 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 SMAD6O43541 496 aaKnown RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 KLHL41O60662 606 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 ZMPSTE24O75844 475 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 FGF19O95750 216 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 NDST3O95803 873 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 CD160O95971 181 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 FGF1P05230 155 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 HNRNPA1P09651 372 aaKnown RBP eCLIP7.74□□□□□ -1.17
SOX6-211ENST00000528429 HLA-DPA1P20036 260 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 WEE1P30291 646 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 GNALP38405 381 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 SLC1A2P43004 574 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 ARSDP51689 593 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 NEK3P51956 506 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 SLC18A1P54219 525 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 EPHA5P54756 1037 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 PDE1CQ14123 709 aaPredicted RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 RFTN1Q14699 578 aaPredicted RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 PTPRRQ15256 657 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 TSTD2Q5T7W7 516 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 RETSATQ6NUM9 610 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 NEPROQ6NW34 567 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 RAPH1Q70E73 1250 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 LDB1Q86U70 411 aaPredicted RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 ARID3BQ8IVW6 561 aaPredicted RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 FAM217AQ8IXS0 508 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 NAT16Q8N8M0 369 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 ITFG1Q8TB96 612 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 PTCD2Q8WV60 388 aaKnown RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 HDAC10Q969S8 669 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 ZNF707Q96C28 371 aaPredicted RBP7.74□□□□□ -1.17
SOX6-211ENST00000528429 SEC16BQ96JE7 1060 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 PITPNM3Q9BZ71 974 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 PRKD2Q9BZL6 878 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 TNKS2Q9H2K2 1166 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 TREX1Q9NSU2 369 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 GGT7Q9UJ14 662 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 CDH22Q9UJ99 828 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 OR51B4Q9Y5P0 310 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 RAI2Q9Y5P3 530 aa7.74□□□□□ -1.17
SOX6-211ENST00000528429 A0A0U1RQS6 177 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 RFXAPO00287 272 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 IFRD1O00458 451 aaPredicted RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 HGSO14964 777 aaPredicted RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 AURKAO14965 403 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 PHGDHO43175 533 aaKnown RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 PRMT3O60678 531 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 AHSGP02765 367 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 FESP07332 822 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 HOXA9P31269 272 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 GKP32189 559 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 ARCN1P48444 511 aaKnown RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 SERPINB4P48594 390 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 STK19P49842 368 aaPredicted RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 SERPINB8P50452 374 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 EPHB1P54762 984 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 ERVK-21P61565 698 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 TNK2Q07912 1038 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 USP10Q14694 798 aaKnown RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 GRM3Q14832 879 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 PDK4Q16654 411 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 ZNF783Q6ZMS7 281 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 CPXM2Q8N436 756 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 OR13C4Q8NGS5 318 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 TADA1Q96BN2 335 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 ALG14Q96F25 216 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 DNAJC1Q96KC8 554 aaKnown RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 PBX4Q9BYU1 374 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 MRPL46Q9H2W6 279 aaKnown RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 POLMQ9NP87 494 aaPredicted RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 FBXO6Q9NRD1 293 aaPredicted RBP7.73□□□□□ -1.17
SOX6-211ENST00000528429 LHX3Q9UBR4 397 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 PLLPQ9Y342 182 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 PCDHB9Q9Y5E1 797 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 XIRP2A4UGR9 3374 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 AHCYL1O43865 530 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 CR2P20023 1033 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 BGNP21810 368 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 DDX6P26196 483 aaKnown RBP eCLIP7.73□□□□□ -1.17
SOX6-211ENST00000528429 HLA-FP30511 346 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 SLC8A1P32418 973 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 CCNFP41002 786 aa7.73□□□□□ -1.17
SOX6-211ENST00000528429 CTSOP43234 321 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms