RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 RAB15P59190 212 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 ACOX1Q15067 660 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 PNCKQ6P2M8 343 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 ATCAYQ86WG3 371 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 NLGN4XQ8N0W4 816 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 NLGN4YQ8NFZ3 816 aaPredicted RBP13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 ATP13A3Q9H7F0 1226 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 FHOD1Q9Y613 1164 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 CREBBPQ92793 2442 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 CENPEQ02224 2701 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 LOC101059948A0A1B0GTJ6 334 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 B4E171 279 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 J3KR12 359 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 PPM1DO15297 605 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 CREB3O43889 395 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 FUCA1P04066 466 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 CEACAM5P06731 702 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 MYCLP1P12525 358 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 TSPAN7P41732 249 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 RGRP47804 291 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 PPM1FP49593 454 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 KLRB1Q12918 225 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 SEPT6Q14141 434 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 ATP1A1-AS1Q5TC04 95 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 DPY19L2P1Q6NXN4 242 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 DPPA4Q7L190 304 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 SLFN11Q7Z7L1 901 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 SRLQ86TD4 932 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 HEATR4Q86WZ0 1026 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 PTCD2Q8WV60 388 aaKnown RBP13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 CENPIQ92674 756 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 NTAN1Q96AB6 310 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 CTRCQ99895 268 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 PDFQ9HBH1 243 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 KCNK4Q9NYG8 393 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 SUFUQ9UMX1 484 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 TP53TG5Q9Y2B4 290 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 ITPR2Q14571 2701 aa13.01□□□□□ -0.33
CLNS1A-207ENST00000527133 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
CLNS1A-207ENST00000527133 KRT7P08729 469 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 NR1D1P20393 614 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 MMP8P22894 467 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 MAP4P27816 1152 aaKnown RBP13□□□□□ -0.33
CLNS1A-207ENST00000527133 CD97P48960 835 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 MLLT10P55197 1068 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 BCL2L1Q07817 233 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 SQSTM1Q13501 440 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 MAN2A1Q16706 1144 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 SNAP47Q5SQN1 464 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 C16orf46Q6P387 395 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 KDELC2Q7Z4H8 507 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 NAGSQ8N159 534 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 UMODL1-AS1Q8N2C9 162 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 BMPERQ8N8U9 685 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 TSEN2Q8NCE0 465 aaKnown RBP13□□□□□ -0.33
CLNS1A-207ENST00000527133 SLC30A5Q8TAD4 765 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 EPS8L1Q8TE68 723 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 SLC20A1Q8WUM9 679 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 STARD8Q92502 1023 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 ECHDC3Q96DC8 303 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 RTP4Q96DX8 246 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 NUS1Q96E22 293 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 TEFMQ96QE5 360 aaKnown RBP13□□□□□ -0.33
CLNS1A-207ENST00000527133 DPYSL5Q9BPU6 564 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 C11orf70Q9BRQ4 267 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 EFHD1Q9BUP0 239 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 CATSPERBQ9H7T0 1116 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 PHPT1Q9NRX4 125 aaPredicted RBP13□□□□□ -0.33
CLNS1A-207ENST00000527133 TRNAU1APQ9NX07 287 aaKnown RBP13□□□□□ -0.33
CLNS1A-207ENST00000527133 PLEKHB1Q9UF11 243 aaPredicted RBP13□□□□□ -0.33
CLNS1A-207ENST00000527133 ST14Q9Y5Y6 855 aa13□□□□□ -0.33
CLNS1A-207ENST00000527133 A8MU76 341 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 WASH4PA8MWX3 477 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 PRAMEF11O60813 436 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 RFC1P35251 1148 aaPredicted RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 POLD2P49005 469 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 POLR2LP62875 67 aaKnown RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 CTBSQ01459 385 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 MC1RQ01726 317 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 KLHDC7AQ5VTJ3 777 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 TMEM71Q6P5X7 295 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 TIPARPQ7Z3E1 657 aaKnown RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 ZNF761Q86XN6 746 aaPredicted RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 TEX19Q8NA77 164 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 AHCYL2Q96HN2 611 aaKnown RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 CELF6Q96J87 481 aaKnown RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 COQ10AQ96MF6 247 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 TEX101Q9BY14 249 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 FRMD8Q9BZ67 464 aaPredicted RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 SPRY4Q9C004 299 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 NDST4Q9H3R1 872 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 LRRC19Q9H756 370 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 B4GALT6Q9UBX8 382 aa12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 TEP1Q99973 2627 aaKnown RBP12.99□□□□□ -0.33
CLNS1A-207ENST00000527133 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
CLNS1A-207ENST00000527133 GOLGA6CA6NDK9 693 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms