RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 BNIP3Q12983 259 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 GRIK2Q13002 908 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 MPP3Q13368 585 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 C1orf61Q13536 156 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PDE1CQ14123 709 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ARHGEF7Q14155 803 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 STAT4Q14765 748 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 POU6F1Q14863 301 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 LRRC14Q15048 493 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PPP1R7Q15435 360 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TRADDQ15628 312 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CDKN3Q16667 212 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CYP1B1Q16678 543 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DUOXA1Q1HG43 343 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 KIF19Q2TAC6 998 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 P3H1Q32P28 736 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 AASDHQ4L235 1098 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SETMARQ53H47 684 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 HS1BP3Q53T59 392 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PLA2G2CQ5R387 149 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 HP1BP3Q5SSJ5 553 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 KCTD11Q693B1 232 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 NAPEPLDQ6IQ20 393 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DENND5AQ6IQ26 1287 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 KIAA1161Q6NSJ0 714 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC70Q6NSX1 233 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CES3Q6UWW8 571 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 RANBP10Q6VN20 620 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PPP1R21Q6ZMI0 780 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 Q6ZSR6 202 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 MARK2Q7KZI7 788 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 RD3Q7Z3Z2 195 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 GLT6D1Q7Z4J2 308 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ZSCAN30Q86W11 494 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 GATAD2AQ86YP4 633 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SPNS2Q8IVW8 549 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 RBFAQ8N0V3 343 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC22A18ASQ8N1D0 253 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 MPP5Q8N3R9 675 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TTC30BQ8N4P2 665 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DNAAF3Q8N9W5 541 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TP53I13Q8NBR0 393 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 GPR26Q8NDV2 337 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SPATA4Q8NEY3 305 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 OR13C4Q8NGS5 318 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ATL2Q8NHH9 583 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DNASE2BQ8WZ79 361 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 RUBCNQ92622 972 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TSACCQ96A04 125 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 RAB7BQ96AH8 199 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CENPTQ96BT3 561 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 RTP4Q96DX8 246 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 NUS1Q96E22 293 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC97Q96F63 343 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 COQ10AQ96MF6 247 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF778Q96MU6 729 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CAMK1GQ96NX5 476 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 VAT1Q99536 393 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 KLF6Q99612 283 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 EDEM2Q9BV94 578 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 RIOK2Q9BVS4 552 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ADGRE3Q9BY15 652 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 IRF2BPLQ9H1B7 796 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DPH5Q9H2P9 285 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TCEAL2Q9H3H9 227 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 KDM4CQ9H3R0 1056 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A7Q9HAW7 530 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A10Q9HAW8 530 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A8Q9HAW9 530 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 MRPL40Q9NQ50 206 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 HAUS2Q9NVX0 235 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC2A6Q9UGQ3 507 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ASIC3Q9UHC3 531 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PNMA8BQ9ULN7 279 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC6A14Q9UN76 642 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DRG1Q9Y295 367 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TMEM98Q9Y2Y6 226 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PPIL1Q9Y3C6 166 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PRKAB1Q9Y478 270 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DOCK4Q8N1I0 1966 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 GOLGA6L10A0A0M3HER8 536 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 A0A1B0GTW7 788 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 TMEM202A6NGA9 273 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 A6NNZ2 444 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 C4orf47A7E2U8 309 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FADS2P1A8MWK0 482 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 C10orf142B7Z368 130 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 PROB1E7EW31 1015 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 TLR4O00206 839 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CES2O00748 559 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CDX4O14627 284 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FPGTO14772 594 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 RAD51CO43502 376 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 AP2A1O95782 977 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FUCA1P04066 466 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CELA2BP08218 269 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 C7P10643 843 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 GNSP15586 552 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 BPIP17213 487 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CA4P22748 312 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms