RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 NAA15Q9BXJ9 866 aaKnown RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 NUP62CLQ9H1M0 184 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 UNC45AQ9H3U1 944 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 PDZD7Q9H5P4 517 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 RPF1Q9H9Y2 349 aaKnown RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 PRMT7Q9NVM4 692 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 GDAQ9Y2T3 454 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 A0A1W2PPC4 97 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 TCP11X1B4DZS4 312 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 PHGDHO43175 533 aaKnown RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 GRID2O43424 1007 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 PRICKLE3O43900 615 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 CNOT4O95628 575 aaKnown RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 CD1AP06126 327 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 HAPLN1P10915 354 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 TGM2P21980 687 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 CD38P28907 300 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 ACSL1P33121 698 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 GNAQP50148 359 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 NXPH1P58417 271 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 PPP2CBP62714 309 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 PPP2CAP67775 309 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 SMARCB1Q12824 385 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 MRPL49Q13405 166 aaKnown RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 POLD3Q15054 466 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 LONRF1Q17RB8 773 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 PRR16Q569H4 304 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 KHDC1LQ5JSQ8 128 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 LY6G5CQ5SRR4 150 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 BRIX1Q8TDN6 353 aaKnown RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 SCFD1Q8WVM8 642 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 LENG9Q96B70 501 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 SLC39A13Q96H72 371 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 LRRC37BQ96QE4 947 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 LMF1Q96S06 567 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 SLC29A3Q9BZD2 475 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 LRRC27Q9C0I9 530 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 ENKD1Q9H0I2 346 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 C11orf54Q9H0W9 315 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-203ENST00000524927 GLT8D2Q9H1C3 349 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 TBC1D14Q9P2M4 693 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 OAZ3Q9UMX2 235 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 TP53TG5Q9Y2B4 290 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 STON1Q9Y6Q2 735 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 PKD1L1Q8TDX9 2849 aa7.22□□□□□ -1.25
NEDD8-203ENST00000524927 COL27A1Q8IZC6 1860 aaPredicted RBP7.21□□□□□ -1.25
NEDD8-203ENST00000524927 ZNF469Q96JG9 3925 aaPredicted RBP7.21□□□□□ -1.25
NEDD8-203ENST00000524927 NUMA1Q14980 2115 aa7.21□□□□□ -1.25
NEDD8-203ENST00000524927 A0A1W2PR77 199 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 WASH3PC4AMC7 463 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 F2RL2O00254 374 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 MATN2O00339 956 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 KIAA0391O15091 583 aaKnown RBP7.21□□□□□ -1.26
NEDD8-203ENST00000524927 NPC1O15118 1278 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 DKC1O60832 514 aaKnown RBP eCLIP7.21□□□□□ -1.26
NEDD8-203ENST00000524927 LDHAP00338 332 aaKnown RBP7.21□□□□□ -1.26
NEDD8-203ENST00000524927 CALM1P0DP23 149 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 CALM2P0DP24 149 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 CALM3P0DP25 149 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 KITP10721 976 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 KCNE1P15382 129 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 CIITAP33076 1130 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 ZXDBP98169 803 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 FAM187BQ17R55 369 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 DCAF4L1Q3SXM0 396 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 TCTN3Q6NUS6 607 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 APOA5Q6Q788 366 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 ALKAL1Q6UXT8 129 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 PLXDC1Q8IUK5 500 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 FTSJ3Q8IY81 847 aaKnown RBP7.21□□□□□ -1.26
NEDD8-203ENST00000524927 FSIP1Q8NA03 581 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 CTCFLQ8NI51 663 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-203ENST00000524927 SPPL2BQ8TCT7 592 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 APOBEC4Q8WW27 367 aaKnown RBP7.21□□□□□ -1.26
NEDD8-203ENST00000524927 OTUB2Q96DC9 234 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 TBCBQ99426 244 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 MYOCQ99972 504 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 MRI1Q9BV20 369 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 C22orf23Q9BZE7 217 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 BTBD1Q9H0C5 482 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 SLAMF7Q9NQ25 335 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 SEL1LQ9UBV2 794 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 MAGED2Q9UNF1 606 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-203ENST00000524927 MYOFQ9NZM1 2061 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 TTC41PQ6P2S7 1318 aa7.21□□□□□ -1.26
NEDD8-203ENST00000524927 ERICH2A1L162 156 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 PRRT4C9JH25 899 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 TLR4O00206 839 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 MSH4O15457 936 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 HOXA3O43365 443 aaPredicted RBP7.2□□□□□ -1.26
NEDD8-203ENST00000524927 CNTN5O94779 1100 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SIX3O95343 332 aaPredicted RBP7.2□□□□□ -1.26
NEDD8-203ENST00000524927 IGHV4-34P06331 123 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 MTHFD1P11586 935 aaKnown RBP7.2□□□□□ -1.26
NEDD8-203ENST00000524927 TYMPP19971 482 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 CD82P27701 267 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SLC7A1P30825 629 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 HSPA4P34932 840 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 UGT1A5P35504 534 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms