RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 SRGAP2BP0DMP2 458 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 ARSBP15848 533 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 TGM2P21980 687 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 CST5P28325 142 aaPredicted RBP4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 HOXD3P31249 432 aaPredicted RBP4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 PDLIM4P50479 330 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 LIMK1P53667 647 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 SLC37A1P57057 533 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 ERVFC1-1P60608 527 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 PSMC6P62333 389 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 CCNA1P78396 465 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 BEX3Q00994 111 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 CSTF1Q05048 431 aaKnown RBP4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 CSHL1Q14406 222 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 HIST2H2BCQ6DN03 193 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 HMBOX1Q6NT76 420 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 CXCL17Q6UXB2 119 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 SLC16A12Q6ZSM3 486 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 WDR75Q8IWA0 830 aaKnown RBP4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 ZBTB44Q8NCP5 570 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 SRFBP1Q8NEF9 429 aaKnown RBP4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 CDT1Q9H211 546 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 TBC1D17Q9HA65 648 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 TBC1D14Q9P2M4 693 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 PLEKHB1Q9UF11 243 aaPredicted RBP4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 DTX4Q9Y2E6 619 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 RABGAP1Q9Y3P9 1069 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 NEUROG3Q9Y4Z2 214 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 KIF26AQ9ULI4 1882 aaPredicted RBP4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 MED13LQ71F56 2210 aa4.13□□□□□ -1.75
NSMCE2-211ENST00000523549 MUC22E2RYF6 1773 aaPredicted RBP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 SIPA1L1O43166 1804 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 PARP14Q460N5 1801 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 ASCC3Q8N3C0 2202 aaKnown RBP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 FAM234BA2RU67 622 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 BTBD18B2RXH4 712 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 J3KTA2 159 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 LRP3O75074 770 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 LDB3O75112 727 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 ITGA5P08648 1049 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 IQCF3P0C7M6 154 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 EIF2S2P20042 333 aaKnown RBP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 CTNNB1P35222 781 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 RFC2P35250 354 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 NRIP1P48552 1158 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 HILS1P60008 231 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 KIF5AQ12840 1032 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 ITGA7Q13683 1181 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 SF3A2Q15428 464 aaKnown RBP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 ZNF528Q3MIS6 628 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 ARL13BQ3SXY8 428 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 STPG1Q5TH74 334 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 FBXL22Q6P050 247 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 WDR93Q6P2C0 686 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 TSSK4Q6SA08 328 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 Q6ZTK2 550 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 KDELC2Q7Z4H8 507 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 RASGRP3Q8IV61 690 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 VN1R2Q8NFZ6 395 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 SLC22A17Q8WUG5 538 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 FAR2Q96K12 515 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 MAGEH1Q9H213 219 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 KRCC1Q9NPI7 259 aaPredicted RBP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 CA14Q9ULX7 337 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 SLC8A2Q9UPR5 921 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 DTNAQ9Y4J8 743 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 FN1P02751 2386 aaKnown RBP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 PCNX2A6NKB5 2137 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 AKAP9Q99996 3911 aa4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 ANKHD1Q8IWZ3 2542 aaKnown RBP4.12□□□□□ -1.75
NSMCE2-211ENST00000523549 SCN10AQ9Y5Y9 1956 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 CTAGE5O15320 804 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 RETP07949 1114 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 IGFBP2P18065 325 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 CHRNDQ07001 517 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 IFIT5Q13325 482 aaKnown RBP4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 PMS2P11Q13670 270 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 CAMK1Q14012 370 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 LY6DQ14210 128 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 IZUMO4Q1ZYL8 232 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 HIBCHQ6NVY1 386 aaPredicted RBP4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 C16orf82Q7Z2V1 217 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 ADGRF3Q8IZF5 1079 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 TXLNBQ8N3L3 684 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 ADPRHL1Q8NDY3 354 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 GABPB2Q8TAK5 448 aaPredicted RBP4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 TMEM255BQ8WV15 326 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 TBCBQ99426 244 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 TRIM4Q9C037 500 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 ANKRD2Q9GZV1 360 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 ALDH8A1Q9H2A2 487 aaPredicted RBP4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 NRBP1Q9UHY1 535 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 RAB23Q9ULC3 237 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 C2orf16Q68DN1 1984 aa4.11□□□□□ -1.75
NSMCE2-211ENST00000523549 ATG2BQ96BY7 2078 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms