RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 CDH6P55285 790 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 SQSTM1Q13501 440 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 NR1D2Q14995 579 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 C14orf28Q4W4Y0 310 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 RAB11FIP2Q7L804 512 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 TECPR1Q7Z6L1 1165 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 TAF8Q7Z7C8 310 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 BBS5Q8N3I7 341 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 ZNF843Q8N446 348 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 FBXO39Q8N4B4 442 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 FAM46DQ8NEK8 389 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 TTC9Q92623 222 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 SCARF2Q96GP6 870 aaPredicted RBP12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 NAF1Q96HR8 494 aaKnown RBP12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 TMEM168Q9H0V1 697 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 WDR26Q9H7D7 661 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 NOD2Q9HC29 1040 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 CPNE5Q9HCH3 593 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 PCDHGC4Q9Y5F7 938 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 PRSS38A1L453 326 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 PGLSO95336 258 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 FUCA1P04066 466 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 PRB1P04280 392 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 RPLP0P05388 317 aaKnown RBP12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 CYP2A6P11509 494 aaPredicted RBP12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 CCNB1P14635 433 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 TCF4P15884 667 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 SERPINB6P35237 376 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 B4GALNT1Q00973 533 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 CFHR1Q03591 330 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 CLN3Q13286 438 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 PEX6Q13608 980 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 ZNF235Q14590 738 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 ACOX1Q15067 660 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 CNGA3Q16281 694 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 ARHGAP40Q5TG30 622 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 MARC1Q5VT66 337 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 ALG1LQ6GMV1 187 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 XKR5Q6UX68 686 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 B3GNT8Q7Z7M8 397 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 NRROSQ86YC3 692 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 CCNJLQ8IV13 435 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 PELI3Q8N2H9 469 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 PIH1D2Q8WWB5 315 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 DTD2Q96FN9 168 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 FRMD8Q9BZ67 464 aaPredicted RBP12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 PCDH18Q9HCL0 1135 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 SIRPGQ9P1W8 387 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 LRIT1Q9P2V4 623 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 MYO1AQ9UBC5 1043 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 IP6K2Q9UHH9 426 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 AMACRQ9UHK6 382 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 HELZ2Q9BYK8 2649 aaKnown RBP12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 SHROOM3Q8TF72 1996 aa12.65□□□□□ -0.38
TOP1MT-217ENST00000523417 PMS2P1A4D2B8 440 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 EFSO43281 561 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 B4GAT1O43505 415 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SERPING1P05155 500 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 FGF1P05230 155 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SLC5A2P31639 672 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 MMP13P45452 471 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 ARSEP51690 589 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 ZBED6P86452 979 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SLC25A11Q02978 314 aaKnown RBP12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SPECC1LQ69YQ0 1117 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SPRED1Q7Z699 444 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SLITRK4Q8IW52 837 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 KIAA1524Q8TCG1 905 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 NSMCE1Q8WV22 266 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 NUS1Q96E22 293 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 TSGA13Q96PP4 275 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 CCNL2Q96S94 520 aaPredicted RBP12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 CYP4F12Q9HCS2 524 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 MRPL40Q9NQ50 206 aaKnown RBP12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 PHPT1Q9NRX4 125 aaPredicted RBP12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SPATS2LQ9NUQ6 558 aaKnown RBP12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 ATXN7L1Q9ULK2 861 aaPredicted RBP12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 CAPN11Q9UMQ6 739 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 SLC17A4Q9Y2C5 497 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 RNF215Q9Y6U7 377 aa12.64□□□□□ -0.39
TOP1MT-217ENST00000523417 TTC24A2A3L6 582 aaPredicted RBP12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 A8MX80 341 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 MYO1FO00160 1098 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 ZW10O43264 779 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 CPP00450 1065 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 SERPINC1P01008 464 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 IVLP07476 585 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 KRT10P13645 584 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 LHCGRP22888 699 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 GPR3P46089 330 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 PTSQ03393 145 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 TRAF2Q12933 501 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 ARHGEF7Q14155 803 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 PAFAH1B3Q15102 231 aaKnown RBP12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 SMTNL2Q2TAL5 461 aa12.63□□□□□ -0.39
TOP1MT-217ENST00000523417 ARMC12Q5T9G4 340 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms