RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 EML3Q32P44 896 aa25.76■■□□□ 1.71
COL13A1-213ENST00000520267 TRPM5Q9NZQ8 1165 aa25.76■■□□□ 1.71
COL13A1-213ENST00000520267 AGO1Q9UL18 857 aaKnown RBP25.76■■□□□ 1.71
COL13A1-213ENST00000520267 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 ILVBLA1L0T0 632 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 ZNF140P52738 457 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 ZNF177Q13360 481 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 SETD3Q86TU7 594 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 DSELQ8IZU8 1212 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 KYQ8NBH2 561 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 CEP70Q8NHQ1 597 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 SLC26A7Q8TE54 656 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 FAM136AQ96C01 138 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 RMDN1Q96DB5 314 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 NLE1Q9NVX2 485 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 C2orf78A6NCI8 922 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 CBX4O00257 560 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 UBFD1O14562 309 aaKnown RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 PRLP01236 227 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 OGNP20774 298 aaKnown RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 STC1P52823 247 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 C1QTNF8P60827 252 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 PLD1Q13393 1074 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 PELI3Q8N2H9 469 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 HIPK4Q8NE63 616 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 MDGA1Q8NFP4 955 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 SCUBE2Q9NQ36 999 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 POLR3BQ9NW08 1133 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 CORO1CQ9ULV4 474 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-213ENST00000520267 ANKRD36A6QL64 1941 aa25.75■■□□□ 1.71
COL13A1-213ENST00000520267 ANAPC1Q9H1A4 1944 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 FKTNO75072 461 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 CRTAMO95727 393 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 PDHA1P08559 390 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 TSPAN8P19075 237 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 SUOXP51687 545 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 SATB1Q01826 763 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 BLMHQ13867 455 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 HERC3Q15034 1050 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 ZRSR2Q15696 482 aaKnown RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 ZNF678Q5SXM1 525 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 C16orf89Q6UX73 402 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 RNF111Q6ZNA4 994 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 SDCCAG8Q86SQ7 713 aaPredicted RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 RYBPQ8N488 228 aaPredicted RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 MYCBPQ99417 103 aaPredicted RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 AARSD1Q9BTE6 412 aaKnown RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 ABLIM3O94929 683 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 PMLP29590 882 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 TYSND1Q2T9J0 566 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 RNF219Q5W0B1 726 aaPredicted RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 OR4K2Q8NGD2 314 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 ZNF461Q8TAF7 563 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 EXT2Q93063 718 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 FAR2Q96K12 515 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 KLF16Q9BXK1 252 aaPredicted RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 TDRD1Q9BXT4 1180 aaKnown RBP25.74■■□□□ 1.71
COL13A1-213ENST00000520267 MEAF6Q9HAF1 191 aa25.74■■□□□ 1.71
COL13A1-213ENST00000520267 A0A1B0GVM2 712 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 TCAF2A6NFQ2 919 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 GALNT1Q10472 559 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-213ENST00000520267 RFTN1Q14699 578 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-213ENST00000520267 UNC50Q53HI1 259 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 ADGRF1Q5T601 910 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 CHST9Q7L1S5 443 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 GLT6D1Q7Z4J2 308 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 JADE3Q92613 823 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 L3HYPDHQ96EM0 354 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 MYRFLQ96LU7 910 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 YIPF1Q9Y548 306 aa25.73■■□□□ 1.71
COL13A1-213ENST00000520267 SUPT7LO94864 414 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 F11P03951 625 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 ZNF37AP17032 561 aaPredicted RBP25.72■■□□□ 1.71
COL13A1-213ENST00000520267 CXorf57Q6NSI4 855 aaKnown RBP25.72■■□□□ 1.71
COL13A1-213ENST00000520267 ZBED2Q9BTP6 218 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 TBC1D30Q9Y2I9 924 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 PCDHGC4Q9Y5F7 938 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 HOXB8P17481 243 aaPredicted RBP25.72■■□□□ 1.71
COL13A1-213ENST00000520267 OR4D1Q15615 310 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 FAM43BQ6ZT52 329 aaPredicted RBP25.72■■□□□ 1.71
COL13A1-213ENST00000520267 ADGRG6Q86SQ4 1221 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 AFAP1L2Q8N4X5 818 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 LPCAT1Q8NF37 534 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 DEFB118Q96PH6 123 aa25.72■■□□□ 1.71
COL13A1-213ENST00000520267 ZNF184Q99676 751 aaPredicted RBP25.72■■□□□ 1.71
COL13A1-213ENST00000520267 PRPF19Q9UMS4 504 aaKnown RBP25.72■■□□□ 1.71
COL13A1-213ENST00000520267 CCDC189A1A4V9 331 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 H3BMM5 538 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 DSG1Q02413 1049 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 TAF1AQ15573 450 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-213ENST00000520267 PPP1R3AQ16821 1122 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 CHSY3Q70JA7 882 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 CDRT15Q96T59 188 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 MUC3BQ9H195 1237 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 POPDC3Q9HBV1 291 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 SMPD4Q9NXE4 827 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 LRCH1Q9Y2L9 728 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 TRAF6Q9Y4K3 522 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 GBF1Q92538 1859 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 UBA6A0AVT1 1052 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms