RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 OR2AG2A6NM03 316 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CXorf49A8MYA2 514 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 PLIN3O60664 434 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 VPS4BO75351 444 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 GOT2P00505 430 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 FOXN2P32314 431 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ATP6V0D1P61421 351 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CREMQ03060 361 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SOX4Q06945 474 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TRIM32Q13049 653 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 HNRNPDQ14103 355 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 PLA2G4EQ3MJ16 856 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ZIK1Q3SY52 487 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 MSS51Q4VC12 460 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TXNDC8Q6A555 127 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 NAPRTQ6XQN6 538 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 RASAL3Q86YV0 1011 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ZNF557Q8N988 423 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 PEBP4Q96S96 227 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 WRAP53Q9BUR4 548 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 BDH2Q9BUT1 245 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 GATA5Q9BWX5 397 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ATG10Q9H0Y0 220 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 BRD9Q9H8M2 597 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CRTAC1Q9NQ79 661 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 DEC1Q9P2X7 70 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 NDOR1Q9UHB4 597 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TRBV23OR9-2A0A075B6M9 112 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 NEMP2A6NFY4 417 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SRRM3A6NNA2 597 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 MEIS3P2A8K0S8 358 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 C1QTNF3-AMACRE9PGA6 284 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 H0Y858 1186 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 INSIG1O15503 277 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 HNRNPRO43390 633 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 DEAF1O75398 565 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CDK14O94921 469 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TNNI3P19429 210 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CRATP43155 626 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SERPINB10P48595 397 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 PTDSS1P48651 473 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 RAD23AP54725 363 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SLC25A11Q02978 314 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CSTF3Q12996 717 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TSTD2Q5T7W7 516 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CHST9Q7L1S5 443 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 GPR141Q7Z602 305 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 DNAJB7Q7Z6W7 309 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ZNF280BQ86YH2 543 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ZC3H3Q8IXZ2 948 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ULK2Q8IYT8 1036 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TMEM132CQ8N3T6 1108 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 NAT8LQ8N9F0 302 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 KREMEN2Q8NCW0 462 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 FLCNQ8NFG4 579 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CRYGNQ8WXF5 182 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TSSK3Q96PN8 268 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 GPR88Q9GZN0 384 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 FBXL21Q9UKT6 434 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SNX6Q9UNH7 406 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 AP4S1Q9Y587 144 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 C5P01031 1676 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 J3KR12 359 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 IPO13O94829 963 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 PRAMEF1O95521 474 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 FAM58BPP0C7Q3 252 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 KCNE1P15382 129 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SYN1P17600 705 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SLC7A2P52569 658 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CDH4P55283 916 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 WDR4P57081 412 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 RPS7P62081 194 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SQLEQ14534 574 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TRIM60Q495X7 471 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 PREPLQ4J6C6 727 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 FGD3Q5JSP0 725 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 DEPDC1Q5TB30 811 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 PRMT9Q6P2P2 845 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TMC5Q6UXY8 1006 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 UBE2R2Q712K3 238 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 RGL4Q8IZJ4 473 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 OR13C4Q8NGS5 318 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 MAGEE2Q8TD90 523 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 BTN2A2Q8WVV5 523 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 SUSD3Q96L08 255 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TMEM209Q96SK2 561 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TMEM109Q9BVC6 243 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 HAPLN2Q9GZV7 340 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 MAGEH1Q9H213 219 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 RIBC2Q9H4K1 309 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 CDV3Q9UKY7 258 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 ARL5AQ9Y689 179 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TBC1D3DA0A087WVF3 549 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TBC1D3IA0A087WXS9 549 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TBC1D3EA0A087X179 549 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TBC1D3KA0A087X1G2 549 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 LINC00854A0A1B0GVQ3 168 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 MYADML2A6NDP7 307 aa6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TBC1D3FA6NER0 549 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-222ENST00000514654 TBC1D3LB9A6J9 549 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms