RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 GJB3O75712 270 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 HOXD3P31249 432 aaPredicted RBP5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 RPL3P39023 403 aaKnown RBP5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 FOXRED2Q8IWF2 684 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 OR14L1PQ8NHC6 308 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 SCFD2Q8WU76 684 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 ZKSCAN4Q969J2 545 aaPredicted RBP5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 TIGD1Q96MW7 591 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 SPRY4Q9C004 299 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 WDR26Q9H7D7 661 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 MRPL44Q9H9J2 332 aaKnown RBP5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 SLC28A3Q9HAS3 691 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 GPR108Q9NPR9 543 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 RRP7BPQ9NSQ0 103 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 HAUS2Q9NVX0 235 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 RCOR1Q9UKL0 485 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 ERVK-11Q9UQG0 969 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 FAM90A10PA6NDY2 464 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 MYO1GB0I1T2 1018 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 VILLO15195 856 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 CD58P19256 250 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 MAOAP21397 527 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 SCP2P22307 547 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 GPTP24298 496 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 LMO1P25800 156 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 ITGB8P26012 769 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 NAP1L1P55209 391 aaKnown RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 BNC1Q01954 994 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 TRAF3Q13114 568 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 NEDD9Q14511 834 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 TYW3Q6IPR3 259 aaKnown RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 C9orf47Q6ZRZ4 202 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 ZC3HC1Q86WB0 502 aaKnown RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 SPATA6LQ8N4H0 392 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 RRNAD1Q96FB5 475 aaKnown RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 TXNDC15Q96J42 360 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 TMEM68Q96MH6 324 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 LRFN5Q96NI6 719 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 SF3B5Q9BWJ5 86 aaKnown RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 IFIH1Q9BYX4 1025 aaKnown RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 NDST4Q9H3R1 872 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 KAT14Q9H8E8 782 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 SLC9A2Q9UBY0 812 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 FBXO2Q9UK22 296 aaPredicted RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 VPS28Q9UK41 221 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 AGO1Q9UL18 857 aaKnown RBP5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 MYO6Q9UM54 1294 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 PCDHA7Q9UN72 937 aa5.21□□□□□ -1.58
HMGCS1-207ENST00000514610 CLEC18AA5D8T8 446 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 HCRTR2O43614 444 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 SLC25A12O75746 678 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 BMP15O95972 392 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 CH25HO95992 272 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 LDHCP07864 332 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 PCYT1AP49585 367 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 METAP2P50579 478 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 NLRP5P59047 1200 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 MC1RQ01726 317 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 CREB5Q02930 508 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 PRKG2Q13237 762 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 IRF3Q14653 427 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 KRT24Q2M2I5 525 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 ASTE1Q2TB18 679 aaPredicted RBP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 DUSP28Q4G0W2 176 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 TDRD12Q587J7 1177 aaKnown RBP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 PAPPA-AS1Q5QFB9 102 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 FAM69BQ5VUD6 431 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 KIAA0930Q6ICG6 404 aaPredicted RBP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 SARM1Q6SZW1 724 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 GLDNQ6ZMI3 551 aaPredicted RBP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 SEPT14Q6ZU15 432 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 DPPA4Q7L190 304 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 CHST9Q7L1S5 443 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 SZRD1Q7Z422 152 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 CLEC18CQ8NCF0 446 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 OR14A16Q8NHC5 309 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 POMGNT1Q8WZA1 660 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 RND1Q92730 232 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 MIB2Q96AX9 1013 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 FAM120BQ96EK7 910 aaKnown RBP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 ACOX2Q99424 681 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 SYNCQ9H7C4 482 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 PPP1R3EQ9H7J1 279 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 MMP25Q9NPA2 562 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 NOX4Q9NPH5 578 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 SETD4Q9NVD3 440 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 ADD3Q9UEY8 706 aaKnown RBP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 TINAGQ9UJW2 476 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 MAU2Q9Y6X3 613 aa5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 RSF1Q96T23 1441 aaPredicted RBP5.2□□□□□ -1.58
HMGCS1-207ENST00000514610 C1orf226A1L170 272 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 CPED1A4D0V7 1026 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 MYMKA6NI61 221 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 AHCYL1O43865 530 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 NDUFS7O75251 213 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 OAZ2O95190 189 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 GABRB1P18505 474 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 MCM3P25205 808 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 C21orf33P30042 268 aaPredicted RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 CLNS1AP54105 237 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms