RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	SLC38A10	Q9HBR0	1119 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	DPP3	Q9NY33	737 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	TMEM181	Q9P2C4	612 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	SNX5	Q9Y5X3	404 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	PMF1-BGLAP	U3KQ54	211 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	SDHD	O14521	159 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	LSM8	O95777	96 aa	Known RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	FSHR	P23945	695 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	SLC26A2	P50443	739 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	EEF1DP3	Q658K8	133 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CYP20A1	Q6UW02	462 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	GALNT12	Q8IXK2	581 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	SYTL1	Q8IYJ3	562 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CLEC4F	Q8N1N0	589 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	OR6Q1	Q8NGQ2	317 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	EXT2	Q93063	718 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	KIF12	Q96FN5	646 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	NIF3L1	Q9GZT8	377 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	ST6GALNAC4	Q9H4F1	302 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	AS3MT	Q9HBK9	375 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	KIAA1257	Q9ULG3	409 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	PCM1	Q15154	2024 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	PDZK1P1	A8MUH7	402 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	NME4	O00746	187 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	DHX15	O43143	795 aa	Known RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	TPPP	O94811	219 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	JUNB	P17275	347 aa	Predicted RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CHRM3	P20309	590 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	AGXT	P21549	392 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	SERPINB10	P48595	397 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	RABGGTB	P53611	331 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	POU5F1B	Q06416	359 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	KCTD2	Q14681	263 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	ATAD3C	Q5T2N8	411 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.15	□□□□□ -0.62	2e-10	■■■■■ 38.3
PDCD6-210	ENST00000513582	TMEM192	Q8IY95	271 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	LSMEM2	Q8N112	164 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	OMA1	Q96E52	524 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	VPS35	Q96QK1	796 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	ANKEF1	Q9NU02	776 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	COQ3	Q9NZJ6	369 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	VTI1B	Q9UEU0	232 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	ANKRD12	Q6UB98	2062 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CD4	P01730	458 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CRHBP	P24387	322 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	GSTM2	P28161	218 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	SPR	P35270	261 aa	Predicted RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	BAG6	P46379	1132 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	POLD2	P49005	469 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CA9	Q16790	459 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	ZFP69	Q49AA0	526 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	FAM160B1	Q5W0V3	765 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	EFCAB12	Q6NXP0	572 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	TFAP2D	Q7Z6R9	452 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	FAM131B	Q86XD5	332 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	PCDH19	Q8TAB3	1148 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CLEC4D	Q8WXI8	215 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	NDRG1	Q92597	394 aa	Known RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	ZNF669	Q96BR6	464 aa	Predicted RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	MFSD3	Q96ES6	412 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	CERS2	Q96G23	380 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	VMP1	Q96GC9	406 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	TSNARE1	Q96NA8	513 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	B3GNT5	Q9BYG0	378 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	MAGEB5	Q9BZ81	275 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	C12orf4	Q9NQ89	552 aa		11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	TSR3	Q9UJK0	312 aa	Known RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	RUVBL2	Q9Y230	463 aa	Known RBP	11.15	□□□□□ -0.62
PDCD6-210	ENST00000513582	NR5A2	O00482	541 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	NDUFS2	O75306	463 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	TSPAN9	O75954	239 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	PCNA	P12004	261 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	ALOX12	P18054	663 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	SDC4	P31431	198 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	CLCNKB	P51801	687 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	BACE1	P56817	501 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	ZNF460	Q14592	562 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	TMEM132B	Q14DG7	1078 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	DPY19L1	Q2PZI1	675 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	CDON	Q4KMG0	1287 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	SPRED1	Q7Z699	444 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	SMG8	Q8ND04	991 aa	Known RBP	11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	SLC22A17	Q8WUG5	538 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	KCTD4	Q8WVF5	259 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	DUS3L	Q96G46	650 aa	Known RBP	11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	REXO4	Q9GZR2	422 aa	Known RBP	11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	CYP4F12	Q9HCS2	524 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	TLK1	Q9UKI8	766 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	NRAP	Q86VF7	1730 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	CIT	O14578	2027 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	CENPX	A8MT69	81 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	MYC	P01106	439 aa	Predicted RBP	11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	TXN	P10599	105 aa	Known RBP	11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	PGAM1	P18669	254 aa		11.14	□□□□□ -0.63
PDCD6-210	ENST00000513582	YWHAQ	P27348	245 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms