RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 UBAP1Q9NZ09 502 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 PCDHB1Q9Y5F3 818 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 NID2Q14112 1375 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 RPP40O75818 363 aaKnown RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 NUDT14O95848 222 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 ZNF37AP17032 561 aaPredicted RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 SLC26A3P40879 764 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 PTPN9P43378 593 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 CDH13P55290 713 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 ZSWIM7Q19AV6 140 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 TIGD2Q4W5G0 525 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 RNASEH2BQ5TBB1 312 aaKnown RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 GPR107Q5VW38 600 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 ZDHHC20Q5W0Z9 365 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 TCAIMQ8N3R3 496 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 TIFAQ96CG3 184 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 NIFKQ9BYG3 293 aaKnown RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 ASAH2Q9NR71 780 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 LYVE1Q9Y5Y7 322 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 CCNE2O96020 404 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PCSK2P16519 638 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 GALNT3Q14435 633 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PARP15Q460N3 678 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 TAPT1Q6NXT6 567 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 DRICH1Q6PGQ1 229 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 IZUMO1Q8IYV9 350 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 RBM15BQ8NDT2 890 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 SKA1Q96BD8 255 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 SLC47A1Q96FL8 570 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 BTN2A3PQ96KV6 586 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 ZNF607Q96SK3 696 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 NPAS2Q99743 824 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 COQ7Q99807 217 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 TMPRSS4Q9NRS4 437 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 TBC1D3BA6NDS4 549 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 URADA6NGE7 173 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PIRTP0C851 137 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 MPSTP25325 297 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 THOP1P52888 689 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PSMD4P55036 377 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 TUSC3Q13454 348 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 GALNT18Q6P9A2 607 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 GPR142Q7Z601 462 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 RTL3Q8N8U3 475 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 POC5Q8NA72 575 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 SPPL2BQ8TCT7 592 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 LRRN4Q8WUT4 740 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 IRGQQ8WZA9 623 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 AP3S1Q92572 193 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 LENG1Q96BZ8 264 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 EGFL7Q9UHF1 273 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 ZNF510Q9Y2H8 683 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 RIMS1Q86UR5 1692 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 CLDN11O75508 207 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 DBTP11182 482 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 TM4SF1P30408 202 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 OLR1P78380 273 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 HECTD2Q5U5R9 776 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PGAM4Q8N0Y7 254 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 CLP1Q92989 425 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 SDCBP2Q9H190 292 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 WDR55Q9H6Y2 383 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 RAB26Q9ULW5 256 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 CCDC189A1A4V9 331 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 G3V2T6 193 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 GCATO75600 419 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 LRIG2O94898 1065 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 AP2A1O95782 977 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 MAPK9P45984 424 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 SMAD3P84022 425 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 GRM3Q14832 879 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 RAET1GQ6H3X3 334 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 VSTM1Q6UX27 236 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 C16orf62Q7Z3J2 963 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 GPR20Q99678 358 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 TDRD1Q9BXT4 1180 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 WDR12Q9GZL7 423 aaKnown RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 BRD9Q9H8M2 597 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PRMT5O14744 637 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-210ENST00000512756 BMP7P18075 431 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 LIMK2P53671 638 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 SPIBQ01892 262 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 TMEM63BQ5T3F8 832 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 COLGALT2Q8IYK4 626 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 FAM47BQ8NA70 645 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 MCRS1Q96EZ8 462 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 ZNHIT2Q9UHR6 403 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 CDH22Q9UJ99 828 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 PCDHB9Q9Y5E1 797 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 FADS3Q9Y5Q0 445 aa12.48□□□□□ -0.41
COL11A1-210ENST00000512756 STON1Q9Y6Q2 735 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms