RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 ZNF830Q96NB3 372 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 CSPG4P5Q96PW8 444 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 KLF6Q99612 283 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 BAG1Q99933 345 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 SLC12A9Q9BXP2 914 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 FOXP3Q9BZS1 431 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 NOL6Q9H6R4 1146 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 SP110Q9HB58 689 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 SALL4Q9UJQ4 1053 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 PLAAQ9Y263 795 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 MFHAS1Q9Y4C4 1052 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 PCDHA13Q9Y5I0 950 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 EPN1Q9Y6I3 576 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 ANKRD36A6QL64 1941 aa9.28□□□□□ -0.92
UBE2D3-223ENST00000508249 MED13Q9UHV7 2174 aa9.27□□□□□ -0.92
UBE2D3-223ENST00000508249 SHANK1Q9Y566 2161 aa9.27□□□□□ -0.92
UBE2D3-223ENST00000508249 DNHD1Q96M86 4753 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PRAMEF33A0A0G2JMD5 474 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 A0A1W2PQ67 120 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 NEMP2A6NFY4 417 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 A6NNZ2 444 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 C9orf172C9J069 976 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 KPNA3O00505 521 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 NVLO15381 856 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 SMAD6O43541 496 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PSTPIP1O43586 416 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 AP1G1O43747 822 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 SPOPO43791 374 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PRAMEF10O60809 474 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 CD160O95971 181 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 CELA2BP08218 269 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 POU3F2P20265 443 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 NFKBIAP25963 317 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 NOP2P46087 812 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 CD97P48960 835 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 ARSEP51690 589 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 CCNHP51946 323 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 NEK3P51956 506 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 DPYSL3Q14195 570 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 MESDQ14696 234 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 NR0B2Q15466 257 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 ZFYVE27Q5T4F4 411 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 C11orf63Q6NUN7 778 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 DPY19L3Q6ZPD9 716 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 ERN2Q76MJ5 926 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 RAB11FIP2Q7L804 512 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 TMPRSS9Q7Z410 1059 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PTAR1Q7Z6K3 402 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PARGQ86W56 976 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 ZFAND4Q86XD8 727 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 ARHGAP12Q8IWW6 846 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 ATPAF2Q8N5M1 289 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 TPCN2Q8NHX9 752 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 FAM174AQ8TBP5 190 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 FATE1Q969F0 183 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 VOPP1Q96AW1 172 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 MIB2Q96AX9 1013 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 TUBGCP5Q96RT8 1024 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 LRRC61Q9BV99 259 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 MAGEB5Q9BZ81 275 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 CPEB1Q9BZB8 566 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 SLC39A8Q9C0K1 460 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 CLPBQ9H078 707 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 KLC2Q9H0B6 622 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 ADNPQ9H2P0 1102 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PDFQ9HBH1 243 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 HECAQ9UBI9 543 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 DKK3Q9UBP4 350 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PLEKHB1Q9UF11 243 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 SEPT3Q9UH03 358 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 AMACRQ9UHK6 382 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 IPO11Q9UI26 975 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 FCF1Q9Y324 198 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 WASF2Q9Y6W5 498 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PDZD2O15018 2839 aa9.27□□□□□ -0.93
UBE2D3-223ENST00000508249 PRRC2CQ9Y520 2896 aaKnown RBP9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 NF1P21359 2839 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 K7ERQ8 282 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 DFFAO00273 331 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 TPP1O14773 563 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 PJA2O43164 708 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 BNIP3LO60238 219 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 ZNF821O75541 412 aaPredicted RBP9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 LEFTY1O75610 366 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 AKT2P31751 481 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 CCKBRP32239 447 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 PAPOLAP51003 745 aaKnown RBP9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 DNA2P51530 1060 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 VAV2P52735 878 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 INHBCP55103 352 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 POLE2P56282 527 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 PFN3P60673 137 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 AP1S1P61966 158 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 NSUN2Q08J23 767 aaKnown RBP eCLIP9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 KCNAB2Q13303 367 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 SPIDRQ14159 915 aa9.26□□□□□ -0.93
UBE2D3-223ENST00000508249 PAFAH1B3Q15102 231 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms