RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SPATC1LQ9H0A9 340 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 MINDY3Q9H8M7 445 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ANLNQ9NQW6 1124 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CHRAC1Q9NRG0 131 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 AGPAT4Q9NRZ5 378 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TBC1D13Q9NVG8 400 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 INTS10Q9NVR2 710 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CUEDC1Q9NWM3 386 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PIH1D1Q9NWS0 290 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SMPD3Q9NY59 655 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SCHIP1Q9P0W5 487 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 GMIPQ9P107 970 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ABCD2Q9UBJ2 740 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 HACL1Q9UJ83 578 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 FBXW11Q9UKB1 542 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PACSIN3Q9UKS6 424 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 COQ6Q9Y2Z9 468 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SH3BP1Q9Y3L3 701 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRAF6Q9Y4K3 522 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 FADS3Q9Y5Q0 445 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 LOC285556D6RIA3 1793 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ANK1P16157 1881 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 KAT6AQ92794 2004 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RRN3P2A6NIE6 340 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 H3BMQ9 156 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 UBXN8O00124 270 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 FBP2O00757 339 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 FGF10O15520 208 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CACNG3O60359 315 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 USP12O75317 370 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TULP3O75386 442 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 E2F6O75461 281 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SUPT3HO75486 399 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TIPRLO75663 272 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 MATN4O95460 622 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CPNE6O95741 557 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 BCL10O95999 233 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CHEK2O96017 543 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 HPRP00739 348 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 LDLRP01130 860 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 AHSGP02765 367 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ALBP02768 609 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 FGF4P08620 206 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SBK3P0C264 359 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TXNP10599 105 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 INSRRP14616 1297 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CPB1P15086 417 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NPR3P17342 541 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 LBPP18428 481 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 IMPDH1P20839 514 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CDH3P22223 829 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 LORP23490 312 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCNCP24863 283 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NMBRP28336 390 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 MSX2P35548 267 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RPS9P46781 194 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 GLRBP48167 497 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 IREB2P48200 963 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SERPINB10P48595 397 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 HLCSP50747 726 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCT8P50990 548 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 BCAP31P51572 246 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC5A3P53794 718 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATXN3P54252 364 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 EEFSECP57772 596 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NFKB2Q00653 900 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RELAQ04206 551 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ADIGQ0VDE8 80 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SEMA3BQ13214 749 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NME3Q13232 169 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF846Q147U1 533 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC14A2Q15849 920 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZBTB6Q15916 424 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 FSCN1Q16658 493 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 KIF19Q2TAC6 998 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRIM16LQ309B1 348 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TECRLQ5HYJ1 363 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RNFT1Q5M7Z0 435 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RBM48Q5RL73 367 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 C6orf10Q5SRN2 563 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NBPF12Q5TAG4 269 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 C9orf57Q5W0N0 161 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NEPROQ6NW34 567 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TAF2Q6P1X5 1199 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NOTUMQ6P988 496 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC27A1Q6PCB7 646 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 DCLRE1AQ6PJP8 1040 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF773Q6PK81 442 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 PAOXQ6QHF9 649 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 DCDC5Q6ZRR9 648 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 NCCRP1Q6ZVX7 275 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 PIGZQ86VD9 579 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CDR2LQ86X02 465 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 PROSER1Q86XN7 944 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CBR4Q8N4T8 237 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATPAF2Q8N5M1 289 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 LINC01465Q8N7H1 131 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF513Q8N8E2 541 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNX31Q8N9S9 440 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TXNDC5Q8NBS9 432 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms