RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 CPT1BQ92523 772 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 PRCCQ92733 491 aaPredicted RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 SLCO2A1Q92959 643 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 USP13Q92995 863 aaPredicted RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF707Q96C28 371 aaPredicted RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 TMA16Q96EY4 203 aaKnown RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 C1orf74Q96LT6 269 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 PRICKLE1Q96MT3 831 aaPredicted RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 SPATA13Q96N96 652 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 PTCHD1Q96NR3 888 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 OLFM3Q96PB7 478 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 RBM15Q96T37 977 aaKnown RBP eCLIP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 RUFY1Q96T51 708 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 PRMT1Q99873 361 aaKnown RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 LINC00597Q9H2U6 94 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 SEMA4AQ9H3S1 761 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 TASP1Q9H6P5 420 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 NOL6Q9H6R4 1146 aaKnown RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 KIF9Q9HAQ2 790 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 NT5MQ9NPB1 228 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 FAM86C1Q9NVL1 165 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 RBM22Q9NW64 420 aaKnown RBP eCLIP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 PAK5Q9P286 719 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 IPO11Q9UI26 975 aaKnown RBP4.84□□□□□ -1.63
CMSS1-209ENST00000497345 MAFFQ9ULX9 164 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 CLEC4EQ9ULY5 219 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 NEU3Q9UQ49 428 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 CHMP2BQ9UQN3 213 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 PCDHGB7Q9Y5F8 929 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 MAD1L1Q9Y6D9 718 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 WNT6Q9Y6F9 365 aa4.84□□□□□ -1.63
CMSS1-209ENST00000497345 ANAPC1Q9H1A4 1944 aa4.84□□□□□ -1.64
CMSS1-209ENST00000497345 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 TYW5A2RUC4 315 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 GOLGA6BA6NDN3 693 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 C5orf60A6NFR6 353 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ARHGAP42A6NI28 874 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 DRGXA6NNA5 263 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 FOXO6A8MYZ6 492 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ZNF487B1APH4 448 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 NEDD8-MDP1E9PL57 170 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 SNAP91O60641 907 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 MAFKO60675 156 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 GCATO75600 419 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 AGTP01019 485 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 HLA-DQB2P05538 268 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 MGAT1P26572 445 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 HSPA9P38646 679 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CSKP41240 450 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ELK3P41970 407 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 MAGEA4P43358 317 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 GYS2P54840 703 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 DRG2P55039 364 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CDH4P55283 916 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ARL4CP56559 192 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CORO7P57737 925 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 RACK1P63244 317 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CRADDP78560 199 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CBX1P83916 185 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 DSC2Q02487 901 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 GNA12Q03113 381 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CAV1Q03135 178 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 PPIDQ08752 370 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 SLC10A7Q0GE19 358 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 HYAL1Q12794 435 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CDH18Q13634 790 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 PRPSAP1Q14558 356 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 UAP1Q16222 522 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 DNAJC21Q5F1R6 531 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 FSCBQ5H9T9 825 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 RNASEH2BQ5TBB1 312 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 SNX30Q5VWJ9 437 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 KCTD16Q68DU8 428 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 TRIM68Q6AZZ1 485 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CASC4Q6P4E1 433 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 KLHDC10Q6PID8 442 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 MICALCLQ6ZW33 695 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CENPUQ71F23 418 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 NLRP14Q86W24 1093 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 VSIG1Q86XK7 387 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ARID3BQ8IVW6 561 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CCDC117Q8IWD4 279 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 PALM2Q8IXS6 379 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 GPR65Q8IYL9 337 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CMTM8Q8IZV2 173 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 APCDD1Q8J025 514 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 RYBPQ8N488 228 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ZCCHC9Q8N567 271 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 PAF1Q8N7H5 531 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 HJURPQ8NCD3 748 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 OR52K1Q8NGK4 314 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 PYROXD1Q8WU10 500 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 SEC14L1Q92503 715 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 RUBCNQ92622 972 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CAVIN3Q969G5 261 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 RSPRY1Q96DX4 576 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ZFYVE19Q96K21 471 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 EXOC2Q96KP1 924 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms