RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 TYMPP19971 482 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CYP3A5P20815 502 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 ACVRL1P37023 503 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 SYKP43405 635 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 MAP1BP46821 2468 aaKnown RBP6.8□□□□□ -1.32
VIM-207ENST00000495528 LIMK1P53667 647 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 FMO1Q01740 532 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 TUBB3Q13509 450 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 FHL2Q14192 279 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 MYBPC2Q14324 1141 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 DHX8Q14562 1220 aaKnown RBP6.8□□□□□ -1.32
VIM-207ENST00000495528 HLXQ14774 488 aaPredicted RBP6.8□□□□□ -1.32
VIM-207ENST00000495528 KARSQ15046 597 aaKnown RBP6.8□□□□□ -1.32
VIM-207ENST00000495528 IQCB1Q15051 598 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 RBM20Q5T481 1227 aaKnown RBP6.8□□□□□ -1.32
VIM-207ENST00000495528 RRAGBQ5VZM2 374 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CCDC73Q6ZRK6 1079 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CACNA2D4Q7Z3S7 1137 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 TMPRSS9Q7Z410 1059 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 HAUS6Q7Z4H7 955 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 KBTBD6Q86V97 674 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 TOR1AIP2Q8NFQ8 470 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CAVIN3Q969G5 261 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 DHX58Q96C10 678 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CHFRQ96EP1 664 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CALML4Q96GE6 196 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 SENP8Q96LD8 212 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 AK8Q96MA6 479 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CCSER1Q9C0I3 900 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 TASP1Q9H6P5 420 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 SMURF2Q9HAU4 748 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 GKN1Q9NS71 199 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 ANGPTL2Q9UKU9 493 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 UBQLN1Q9UMX0 589 aaKnown RBP6.8□□□□□ -1.32
VIM-207ENST00000495528 CORO2BQ9UQ03 480 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 ASB3Q9Y575 518 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 FRS3O43559 492 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 TRIAP1O43715 76 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 RPP40O75818 363 aaKnown RBP6.79□□□□□ -1.32
VIM-207ENST00000495528 EPN2O95208 641 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 KCNK5O95279 499 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 FGF19O95750 216 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 CCDC192P0DO97 292 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ATF6P18850 670 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 PTMSP20962 102 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 MATR3P43243 847 aaKnown RBP eCLIP6.79□□□□□ -1.32
VIM-207ENST00000495528 RAB32Q13637 225 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 RUNX3Q13761 415 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 CAMK4Q16566 473 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ITPRIPL2Q3MIP1 535 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 MGAT5BQ3V5L5 792 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 SLC39A12Q504Y0 691 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ARHGAP15Q53QZ3 475 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 TMEM196Q5HYL7 178 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 STPG1Q5TH74 334 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 CCDC181Q5TID7 509 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 SPATA1Q5VX52 437 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ARMCX5Q6P1M9 558 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 Q6YL49 198 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ITIH5Q86UX2 942 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ULK2Q8IYT8 1036 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.79□□□□□ -1.32
VIM-207ENST00000495528 SYT2Q8N9I0 419 aaPredicted RBP6.79□□□□□ -1.32
VIM-207ENST00000495528 IQUBQ8NA54 791 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 B3GALNT2Q8NCR0 500 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 BEND2Q8NDZ0 799 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 ENGASEQ8NFI3 743 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 OR10T2Q8NGX3 314 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 SEPT5Q99719 369 aaPredicted RBP6.79□□□□□ -1.32
VIM-207ENST00000495528 AIFM2Q9BRQ8 373 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 TIPINQ9BVW5 301 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 TPSD1Q9BZJ3 242 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 MS4A7Q9GZW8 240 aaPredicted RBP6.79□□□□□ -1.32
VIM-207ENST00000495528 EBF3Q9H4W6 596 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 FBRSL1Q9HCM7 1045 aaKnown RBP6.79□□□□□ -1.32
VIM-207ENST00000495528 HPS4Q9NQG7 708 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 SLC8A2Q9UPR5 921 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 HPSEQ9Y251 543 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 TBC1D30Q9Y2I9 924 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 SNX13Q9Y5W8 968 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 TICRRQ7Z2Z1 1910 aa6.79□□□□□ -1.32
VIM-207ENST00000495528 CNOT1A5YKK6 2376 aaKnown RBP6.79□□□□□ -1.32
VIM-207ENST00000495528 CACNA1GO43497 2377 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 A0A087WWL8 130 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 FAM237AA0A1B0GTK4 181 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 ISM1B1AKI9 464 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 PIRO00625 290 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 TRDMT1O14717 391 aaKnown RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 FAM189A1O60320 539 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 ATG13O75143 517 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 MBD3O95983 291 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 EGFP01133 1207 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 ADRB2P07550 413 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 ATXN1LP0C7T5 689 aaKnown RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 PLA2G4BP0C869 781 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 HKR1P10072 659 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 ODC1P11926 461 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 KRT4P19013 534 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 CD6P30203 668 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 CDC25CP30307 473 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms