RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TEKT1Q969V4 418 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 STK33Q9BYT3 514 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 TP63Q9H3D4 680 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-218ENST00000493430 LIN7CQ9NUP9 197 aaKnown RBP3.37□□□□□ -1.87
PTCD3-218ENST00000493430 OCIAD1Q9NX40 245 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 AATFQ9NY61 560 aaKnown RBP eCLIP3.37□□□□□ -1.87
PTCD3-218ENST00000493430 IGSF9Q9P2J2 1179 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 SLC25A13Q9UJS0 675 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 TRIM17Q9Y577 477 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 PCDHA10Q9Y5I2 948 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 RAI2Q9Y5P3 530 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 DDX49Q9Y6V7 483 aaKnown RBP3.37□□□□□ -1.87
PTCD3-218ENST00000493430 BRCA2P51587 3418 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 MICAL3Q7RTP6 2002 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 MROH7-TTC4A0A0A0MT08 1334 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 ZBED9Q6R2W3 1325 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 KIF16BQ96L93 1317 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 ANK1P16157 1881 aa3.37□□□□□ -1.87
PTCD3-218ENST00000493430 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 TMEM247A6NEH6 219 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 AGAP5A6NIR3 686 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 NTN3O00634 580 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 HSPB6O14558 160 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 SURF6O75683 361 aaKnown RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 IFIT1P09914 478 aaKnown RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 DAOP14920 347 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 PRPH2P23942 346 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 MAP2K2P36507 400 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 THPOP40225 353 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 PCP4P48539 62 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 RCAN1P53805 252 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 GRSF1Q12849 480 aaKnown RBP eCLIP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 PKP1Q13835 747 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 ZRSR1Q15695 479 aaKnown RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 ZNF284Q2VY69 593 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 TBRG1Q3YBR2 411 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 MON1BQ7L1V2 547 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 AACSQ86V21 672 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 DZIP1Q86YF9 867 aaKnown RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 GATAD2AQ86YP4 633 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 ZDHHC23Q8IYP9 409 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 MUC20Q8N307 709 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 RFLNBQ8N5W9 214 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 PJA1Q8NG27 643 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 SDR42E1Q8WUS8 393 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 RSC1A1Q92681 617 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 MUL1Q969V5 352 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 C18orf8Q96DM3 657 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 DYNLL2Q96FJ2 89 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 CCDC138Q96M89 665 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 API5Q9BZZ5 524 aaKnown RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 IL25Q9H293 177 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 CERS4Q9HA82 394 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 Q9N2J8 555 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 TCF7L2Q9NQB0 619 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 RAI14Q9P0K7 980 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 CDH22Q9UJ99 828 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 CNTN6Q9UQ52 1028 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 PCDHGB2Q9Y5G2 931 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 GAKO14976 1311 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 TRIP11Q15643 1979 aa3.36□□□□□ -1.87
PTCD3-218ENST00000493430 RPAP1Q9BWH6 1393 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-218ENST00000493430 PLXNA4Q9HCM2 1894 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 MYH15Q9Y2K3 1946 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 LINC01553A4QN01 128 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 BUB3O43684 328 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 ITM2AO43736 263 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 SERPINI2O75830 405 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 IDH1O75874 414 aaKnown RBP3.35□□□□□ -1.87
PTCD3-218ENST00000493430 CIAO1O76071 339 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 CGAP01215 116 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 IGLV2-11P01706 119 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 UMODP07911 640 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 F7P08709 466 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-218ENST00000493430 PRKCHP24723 683 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 NF2P35240 595 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 IL15P40933 162 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-218ENST00000493430 TM4SF4P48230 202 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 HMGCS2P54868 508 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 LONRF1Q17RB8 773 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 TRIM60Q495X7 471 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 CAVIN4Q5BKX8 364 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 DSTYKQ6XUX3 929 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 CCDC129Q6ZRS4 1044 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 FTSJ3Q8IY81 847 aaKnown RBP3.35□□□□□ -1.87
PTCD3-218ENST00000493430 TEX11Q8IYF3 940 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 SPATA5Q8NB90 893 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 NSUN4Q96CB9 384 aaKnown RBP3.35□□□□□ -1.87
PTCD3-218ENST00000493430 SEC62Q99442 399 aaKnown RBP3.35□□□□□ -1.87
PTCD3-218ENST00000493430 SLC25A33Q9BSK2 321 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 HDHD5Q9BXW7 423 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 TRIM31Q9BZY9 425 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.35□□□□□ -1.87
PTCD3-218ENST00000493430 PDE11AQ9HCR9 933 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 TMEM248Q9NWD8 314 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 SEL1LQ9UBV2 794 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 FLT1P17948 1338 aa3.35□□□□□ -1.87
PTCD3-218ENST00000493430 IGLV5-52A0A0A0MRZ9 124 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 IGHV4-28A0A0C4DH34 117 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 EFCAB8A8MWE9 144 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms