RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF468Q5VIY5 522 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ARHGEF16Q5VV41 709 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 BTBD8Q5XKL5 378 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 FSTL4Q6MZW2 842 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PMF1Q6P1K2 205 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 DPP8Q6V1X1 898 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 COLCA1Q6ZS62 124 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MTSS1LQ765P7 747 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 BHLHA15Q7RTS1 189 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 OVCH1Q7RTY7 1134 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TRAPPC11Q7Z392 1133 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 FRMD5Q7Z6J6 570 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MIB1Q86YT6 1006 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZC3H7AQ8IWR0 971 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MB21D2Q8IYB1 491 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PM20D2Q8IYS1 436 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF295-AS1Q8N0V1 137 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CMTR1Q8N1G2 835 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ARMC10Q8N2F6 343 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 KLHL36Q8N4N3 616 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 OXR1Q8N573 874 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SH2D3CQ8N5H7 860 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SLC25A41Q8N5S1 370 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TOP6BLQ8N6T0 577 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF366Q8N895 744 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF610Q8N9Z0 462 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 BVESQ8NE79 360 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 AGBL3Q8NEM8 1001 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 RDM1Q8NG50 284 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 OR7G1Q8NGA0 311 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 OR6B3Q8NGW1 331 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SLC44A1Q8WWI5 657 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PIGKQ92643 395 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 IRF7Q92985 503 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 C1orf159Q96HA4 380 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZFYVE19Q96K21 471 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 APOLD1Q96LR9 279 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 C12orf66Q96MD2 445 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 POP1Q99575 1024 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MGME1Q9BQP7 344 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 HTATIP2Q9BUP3 242 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 BDH2Q9BUT1 245 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SMG9Q9H0W8 520 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 OR51V1Q9H2C8 321 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 BLZF1Q9H2G9 400 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ECT2Q9H8V3 914 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TRIM45Q9H8W5 580 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SMURF1Q9HCE7 757 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CNGB3Q9NQW8 809 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ABI2Q9NYB9 513 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ARHGAP20Q9P2F6 1191 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZNHIT2Q9UHR6 403 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF229Q9UJW7 825 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 GGA2Q9UJY4 613 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TMEM59LQ9UK28 342 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 FZD10Q9ULW2 581 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 STAP1Q9ULZ2 295 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SPATA2Q9UM82 520 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PLCL2Q9UPR0 1127 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 NCKAP1Q9Y2A7 1128 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 BTBD3Q9Y2F9 522 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PUS1Q9Y606 427 aaKnown RBP eCLIP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 RNF215Q9Y6U7 377 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ABCC11Q96J66 1382 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TRBC2A0A5B9 178 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ELOVL7A1L3X0 281 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MEI4A8MW99 385 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SUPT3HB4E1H0 165 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SLC33A1O00400 549 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 STX16O14662 325 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TSPAN4O14817 238 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SCAMP2O15127 329 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 POLR1CO15160 346 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF185O15231 689 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 DYNC1LI2O43237 492 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CALUO43852 315 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 B4GALT2O60909 372 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TRIM3O75382 744 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SCGB2A1O75556 95 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 UFL1O94874 794 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SIX3O95343 332 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MATN4O95460 622 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 LDLRP01130 860 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 F11P03951 625 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SNRPB2P08579 225 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SPARCP09486 303 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 GNAT1P11488 350 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 INSRRP14616 1297 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ITGA2P17301 1181 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 VCLP18206 1134 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TNFRSF1AP19438 455 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 EIF2S2P20042 333 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 DRD5P21918 477 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CCNE1P24864 410 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ADH6P28332 368 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 GABRB3P28472 473 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 RORAP35398 523 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 KCNJ1P48048 391 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 LIG4P49917 911 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SERPINB9P50453 376 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms