RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 HOXC4P09017 264 aaPredicted RBP15.02■□□□□ -0
UFD1-209ENST00000489406 PAEPP09466 180 aa15.02■□□□□ -0
UFD1-209ENST00000489406 NR2F2P24468 414 aa15.02■□□□□ -0
UFD1-209ENST00000489406 PTPN4P29074 926 aa15.02■□□□□ -0
UFD1-209ENST00000489406 MAPK9P45984 424 aa15.02■□□□□ -0
UFD1-209ENST00000489406 GNPDA1P46926 289 aa15.02■□□□□ -0
UFD1-209ENST00000489406 NASPP49321 788 aaPredicted RBP15.02■□□□□ -0
UFD1-209ENST00000489406 SH3BP2P78314 561 aa15.02■□□□□ -0
UFD1-209ENST00000489406 CTBSQ01459 385 aa15.02■□□□□ -0
UFD1-209ENST00000489406 MTA1Q13330 715 aa15.02■□□□□ -0
UFD1-209ENST00000489406 CUL4BQ13620 913 aa15.02■□□□□ -0
UFD1-209ENST00000489406 ZNF630Q2M218 657 aaPredicted RBP15.02■□□□□ -0
UFD1-209ENST00000489406 FAM173BQ6P4H8 233 aa15.02■□□□□ -0
UFD1-209ENST00000489406 FAM199XQ6PEV8 388 aaPredicted RBP15.02■□□□□ -0
UFD1-209ENST00000489406 LEKR1Q6ZMV7 388 aa15.02■□□□□ -0
UFD1-209ENST00000489406 SYVN1Q86TM6 617 aa15.02■□□□□ -0
UFD1-209ENST00000489406 KCNMB4Q86W47 210 aa15.02■□□□□ -0
UFD1-209ENST00000489406 INPP5DQ92835 1189 aa15.02■□□□□ -0
UFD1-209ENST00000489406 SMAD5Q99717 465 aaKnown RBP15.02■□□□□ -0
UFD1-209ENST00000489406 AKIRIN1Q9H9L7 192 aaPredicted RBP15.02■□□□□ -0
UFD1-209ENST00000489406 TRNAU1APQ9NX07 287 aaKnown RBP15.02■□□□□ -0
UFD1-209ENST00000489406 USP25Q9UHP3 1055 aa15.02■□□□□ -0
UFD1-209ENST00000489406 ACANP16112 2415 aa15.02□□□□□ -0.01
UFD1-209ENST00000489406 SSU72P8A0A1W2PR75 194 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 E5RJQ4 531 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 RNF225M0QZC1 329 aaPredicted RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 CALUO43852 315 aaPredicted RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 BUB1BO60566 1050 aaPredicted RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 MT-ND3P03897 115 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 GPD2P43304 727 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 ACADSBP45954 432 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 ART1P52961 327 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 GNA12Q03113 381 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 LRMPQ12912 555 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 STILQ15468 1287 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 LRRC31Q6UY01 552 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 ZNF783Q6ZMS7 281 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 GUF1Q8N442 669 aaKnown RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 IQUBQ8NA54 791 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 PTCD2Q8WV60 388 aaKnown RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 ITLN2Q8WWU7 325 aaPredicted RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 ARHGEF2Q92974 986 aaKnown RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 BRD8Q9H0E9 1235 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 GSX1Q9H4S2 264 aaPredicted RBP15.01□□□□□ -0.01
UFD1-209ENST00000489406 WDR26Q9H7D7 661 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 PCDH12Q9NPG4 1184 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 ANLNQ9NQW6 1124 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 ARHGEF38Q9NXL2 777 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 FAM13BQ9NYF5 915 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 PLEKHM1Q9Y4G2 1056 aa15.01□□□□□ -0.01
UFD1-209ENST00000489406 PDE2AO00408 941 aaPredicted RBP15□□□□□ -0.01
UFD1-209ENST00000489406 SPAG6O75602 509 aa15□□□□□ -0.01
UFD1-209ENST00000489406 RECQL5O94762 991 aaPredicted RBP15□□□□□ -0.01
UFD1-209ENST00000489406 TMEM63AO94886 807 aa15□□□□□ -0.01
UFD1-209ENST00000489406 PLEKP08567 350 aaPredicted RBP15□□□□□ -0.01
UFD1-209ENST00000489406 PSMC2P35998 433 aaKnown RBP15□□□□□ -0.01
UFD1-209ENST00000489406 TRIM23P36406 574 aa15□□□□□ -0.01
UFD1-209ENST00000489406 ACVRL1P37023 503 aa15□□□□□ -0.01
UFD1-209ENST00000489406 ACTR1BP42025 376 aa15□□□□□ -0.01
UFD1-209ENST00000489406 FASLGP48023 281 aa15□□□□□ -0.01
UFD1-209ENST00000489406 ACTR1AP61163 376 aa15□□□□□ -0.01
UFD1-209ENST00000489406 RPS15P62841 145 aaKnown RBP15□□□□□ -0.01
UFD1-209ENST00000489406 BNC2Q6ZN30 1099 aaPredicted RBP15□□□□□ -0.01
UFD1-209ENST00000489406 PARP9Q8IXQ6 854 aa15□□□□□ -0.01
UFD1-209ENST00000489406 PELI3Q8N2H9 469 aa15□□□□□ -0.01
UFD1-209ENST00000489406 SLC37A2Q8TED4 501 aa15□□□□□ -0.01
UFD1-209ENST00000489406 MED15Q96RN5 788 aa15□□□□□ -0.01
UFD1-209ENST00000489406 GPR87Q9BY21 358 aa15□□□□□ -0.01
UFD1-209ENST00000489406 SERTAD1Q9UHV2 236 aa15□□□□□ -0.01
UFD1-209ENST00000489406 SUFUQ9UMX1 484 aa15□□□□□ -0.01
UFD1-209ENST00000489406 PCDHB4Q9Y5E5 795 aa15□□□□□ -0.01
UFD1-209ENST00000489406 MDC1Q14676 2089 aaKnown RBP14.99□□□□□ -0.01
UFD1-209ENST00000489406 NBEAL1Q6ZS30 2694 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 GOLGA6L3A6NEY3 463 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 TMEM200CA6NKL6 621 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 I6L893 689 aaPredicted RBP14.99□□□□□ -0.01
UFD1-209ENST00000489406 E2F3O00716 465 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 GRAP2O75791 330 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 RHOBTB3O94955 611 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 CEACAM5P06731 702 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 STSP08842 583 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 SUOXP51687 545 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 RAD51Q06609 339 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 ENPEPQ07075 957 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 NFATC2Q13469 925 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 PEX6Q13608 980 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 IL11RAQ14626 422 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 LYPLAL1Q5VWZ2 237 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 HGSNATQ68CP4 663 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 TAOK1Q7L7X3 1001 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 DRC7Q8IY82 874 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 NETO2Q8NC67 525 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 SLC2A13Q96QE2 648 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 TKTL2Q9H0I9 626 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 C5AR2Q9P296 337 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 TRAF3IP3Q9Y228 551 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 NEU2Q9Y3R4 380 aa14.99□□□□□ -0.01
UFD1-209ENST00000489406 ZNF469Q96JG9 3925 aaPredicted RBP14.99□□□□□ -0.01
UFD1-209ENST00000489406 MAP1AP78559 2803 aaPredicted RBP14.98□□□□□ -0.01
UFD1-209ENST00000489406 MYO7BQ6PIF6 2116 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms