RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ESRP1Q6NXG1 681 aaKnown RBP14.03□□□□□ -0.16
VTI1A-206ENST00000489142 PNCKQ6P2M8 343 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 SFTPA2Q8IWL1 248 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 PLD5Q8N7P1 536 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 TC2NQ8N9U0 490 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 OR56A4Q8NGH8 313 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
VTI1A-206ENST00000489142 WDR26Q9H7D7 661 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 USP29Q9HBJ7 922 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 CYP4F12Q9HCS2 524 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 EVA1BQ9NVM1 165 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 DKK4Q9UBT3 224 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 SALL4Q9UJQ4 1053 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 LHX6Q9UPM6 363 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 KIF26BQ2KJY2 2108 aa14.03□□□□□ -0.16
VTI1A-206ENST00000489142 URB1O60287 2271 aaKnown RBP14.02□□□□□ -0.16
VTI1A-206ENST00000489142 TLX3O43711 291 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-206ENST00000489142 BRINP1O60477 761 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 MTA2O94776 668 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 TNFP01375 233 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 MPOP05164 745 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 GP1BAP07359 652 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 COMTP21964 271 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 EPHB1P54762 984 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 KIAA1024LP59773 190 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 ARHGEF7Q14155 803 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 COL28A1Q2UY09 1125 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 LRRC66Q68CR7 880 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 SARM1Q6SZW1 724 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 Q6ZVL8 140 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 USP45Q70EL2 814 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 HEATR4Q86WZ0 1026 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 RFX6Q8HWS3 928 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 LRRC49Q8IUZ0 686 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 RHOT2Q8IXI1 618 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 CCDC13Q8IYE1 715 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 FSTL5Q8N475 847 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-206ENST00000489142 CCL4L1Q8NHW4 92 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 ARRDC2Q8TBH0 407 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-206ENST00000489142 PTCD2Q8WV60 388 aaKnown RBP14.02□□□□□ -0.17
VTI1A-206ENST00000489142 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 DTD2Q96FN9 168 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 SCRN2Q96FV2 425 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 CRELD1Q96HD1 420 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 TBATAQ96M53 351 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 TSGA13Q96PP4 275 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 TMEM168Q9H0V1 697 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 LCMT1Q9UIC8 334 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 GPR34Q9UPC5 381 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 ZFYVE26Q68DK2 2539 aa14.02□□□□□ -0.17
VTI1A-206ENST00000489142 A0A1W2PQ67 120 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 EME2A4GXA9 379 aaPredicted RBP14.01□□□□□ -0.17
VTI1A-206ENST00000489142 SPOPO43791 374 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 FZD6O60353 706 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 USP12O75317 370 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 JCHAINP01591 159 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 MX2P20592 715 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 TRIM23P36406 574 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 CD86P42081 329 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 ARHGAP25P42331 645 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 AP1B1Q10567 949 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 ZBTB17Q13105 803 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 RALGPS1Q5JS13 557 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 RAET1GQ6H3X3 334 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 DOK6Q6PKX4 331 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 TAF8Q7Z7C8 310 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 TRIM74Q86UV6 250 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 GKN2Q86XP6 184 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 LPCAT1Q8NF37 534 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 ATL2Q8NHH9 583 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 TPCN2Q8NHX9 752 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 GLMNQ92990 594 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 CCDC74AQ96AQ1 378 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 HDAC11Q96DB2 347 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 ZNF830Q96NB3 372 aaPredicted RBP14.01□□□□□ -0.17
VTI1A-206ENST00000489142 DEPDC7Q96QD5 511 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 MCCC1Q96RQ3 725 aaPredicted RBP14.01□□□□□ -0.17
VTI1A-206ENST00000489142 RBM15Q96T37 977 aaKnown RBP eCLIP14.01□□□□□ -0.17
VTI1A-206ENST00000489142 CCDC3Q9BQI4 270 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 TDRD1Q9BXT4 1180 aaKnown RBP14.01□□□□□ -0.17
VTI1A-206ENST00000489142 NRSN2Q9GZP1 204 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 RBSNQ9H1K0 784 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 NCKIPSDQ9NZQ3 722 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 SEPT10Q9P0V9 454 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 RABGEF1Q9UJ41 708 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 PADI4Q9UM07 663 aa14.01□□□□□ -0.17
VTI1A-206ENST00000489142 ARHGEF17Q96PE2 2063 aaPredicted RBP14.01□□□□□ -0.17
VTI1A-206ENST00000489142 A0A0J9YYE9 177 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 PRSS38A1L453 326 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 PMS2P1A4D2B8 440 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 B4DGG1 531 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 APOL1O14791 398 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 PRLP01236 227 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 TRBC1P01850 177 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 FUCA1P04066 466 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 MMP2P08253 660 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 MYCLP1P12525 358 aaPredicted RBP14□□□□□ -0.17
VTI1A-206ENST00000489142 MAGEA1P43355 309 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 NOP2P46087 812 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms