RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ESRP1Q6NXG1 681 aaKnown RBP18.67■□□□□ 0.58
PTCD3-217ENST00000488801 KDM7AQ6ZMT4 941 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 FAM71DQ8N9W8 422 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 MAIP1Q8WWC4 291 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 C1orf54Q8WWF1 131 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 SKA1Q96BD8 255 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 KLHDC7BQ96G42 594 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 WDR24Q96S15 920 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 OSBPL9Q96SU4 736 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 ADGRE3Q9BY15 652 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 GAREM1Q9H706 876 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 IL21RQ9HBE5 538 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 UBP1Q9NZI7 540 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 SNX12Q9UMY4 172 aa18.67■□□□□ 0.58
PTCD3-217ENST00000488801 PTPRBP23467 1997 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 A0A0U1RQS6 177 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 A0A1B0GTQ1 180 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 A8MX80 341 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 CEP104O60308 925 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 PMPCBO75439 489 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 STK10O94804 968 aaKnown RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 RXRGP48443 463 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 EPHB1P54762 984 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 PTSQ03393 145 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 MTM1Q13496 603 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 PCSK7Q16549 785 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 RSPO4Q2I0M5 234 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 P3H1Q32P28 736 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 KCTD11Q693B1 232 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 DBX2Q6ZNG2 339 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 PTAR1Q7Z6K3 402 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 DCP2Q8IU60 420 aaKnown RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 PELI3Q8N2H9 469 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 PAF1Q8N7H5 531 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 COG1Q8WTW3 980 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 EID2BQ96D98 161 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 ELF4Q99607 663 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 GTPBP2Q9BX10 602 aaKnown RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 MAGEE1Q9HCI5 957 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 GDF3Q9NR23 364 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 KCTD5Q9NXV2 234 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 NFKBIL1Q9UBC1 381 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 CDV3Q9UKY7 258 aaKnown RBP18.66■□□□□ 0.58
PTCD3-217ENST00000488801 PCDHGB2Q9Y5G2 931 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 BPTFQ12830 3046 aa18.66■□□□□ 0.58
PTCD3-217ENST00000488801 SPTY2D1-AS1A0A0U1RR47 76 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 F5H423 210 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-217ENST00000488801 LZTS3O60299 673 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-217ENST00000488801 DFNA5O60443 496 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 ANXA9O76027 345 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 CD59P13987 128 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 HLA-DPA1P20036 260 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 TEAD1P28347 426 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 STIP1P31948 543 aaKnown RBP18.65■□□□□ 0.58
PTCD3-217ENST00000488801 TRIM23P36406 574 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 ETV3P41162 512 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 GEMP55040 296 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 YPEL5P62699 121 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 DPTQ07507 201 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 SLC14A1Q13336 389 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 ARHGEF7Q14155 803 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 SLC1A5Q15758 541 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 Q6ZSR6 202 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 ZNF765Q7L2R6 523 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 KANSL1Q7Z3B3 1105 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 OXR1Q8N573 874 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 PRELID2Q8N945 189 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 PLA2G15Q8NCC3 412 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 NUS1Q96E22 293 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 IFT43Q96FT9 208 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 PPP1R2P1Q96PQ5 205 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 RTKNQ9BST9 563 aa18.65■□□□□ 0.58
PTCD3-217ENST00000488801 PCDHGA12O60330 932 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 METTL18O95568 372 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 SOD1P00441 154 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 SDHBP21912 280 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 CHRNA4P43681 627 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 ATXN3P54252 364 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-217ENST00000488801 MSLNQ13421 630 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-217ENST00000488801 FZD2Q14332 565 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 ACOX1Q15067 660 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 CYP1B1Q16678 543 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 SIRPB2Q5JXA9 342 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 PAPD7Q5XG87 772 aaKnown RBP18.64■□□□□ 0.57
PTCD3-217ENST00000488801 RANBP10Q6VN20 620 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 RFLNAQ6ZTI6 216 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 Q6ZVL8 140 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 PIP4P1Q86T03 277 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 NLRP8Q86W28 1048 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 IPMKQ8NFU5 416 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 ACTRT1Q8TDG2 376 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 DRG1Q9Y295 367 aaKnown RBP18.64■□□□□ 0.57
PTCD3-217ENST00000488801 AAR2Q9Y312 384 aaKnown RBP18.64■□□□□ 0.57
PTCD3-217ENST00000488801 ZNF711Q9Y462 761 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 SPO11Q9Y5K1 396 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 RP1P56715 2156 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 ASXL3Q9C0F0 2248 aa18.64■□□□□ 0.57
PTCD3-217ENST00000488801 C1orf232A0A0U1RR37 186 aa18.63■□□□□ 0.57
PTCD3-217ENST00000488801 K7ESM1 405 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms