RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 EIF2S3P41091 472 aaKnown RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 GRK6P43250 576 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 SREBF2Q12772 1141 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 TAF5Q15542 800 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 KRT24Q2M2I5 525 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 TCTN1Q2MV58 587 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 C14orf177Q52M58 125 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 ZNF667Q5HYK9 610 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 TADA2BQ86TJ2 420 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 ZNF485Q8NCK3 441 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 LSM14AQ8ND56 463 aaKnown RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 SLC24A4Q8NFF2 622 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 TNIP2Q8NFZ5 429 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 NOC3LQ8WTT2 800 aaKnown RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 SLC39A13Q96H72 371 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 BBS4Q96RK4 519 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 MPHOSPH6Q99547 160 aaKnown RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 LRRC1Q9BTT6 524 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 EGLN1Q9GZT9 426 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 GFRA4Q9GZZ7 299 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 FKRPQ9H9S5 495 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 MKKSQ9NPJ1 570 aaPredicted RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 TMEM30AQ9NV96 361 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 PADI1Q9ULC6 663 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 DVL1O14640 695 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 G6PDP11413 515 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 ITGA2P17301 1181 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 DDX5P17844 614 aaKnown RBP3.87□□□□□ -1.79
CCDC66-221ENST00000487739 S1PR1P21453 382 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 GPD2P43304 727 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 HSD17B4P51659 736 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 NR0B1P51843 470 aaKnown RBP3.87□□□□□ -1.79
CCDC66-221ENST00000487739 DVL1P1P54792 670 aaPredicted RBP3.87□□□□□ -1.79
CCDC66-221ENST00000487739 GRIK3Q13003 919 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 EFR3AQ14156 821 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 TMEM30BQ3MIR4 351 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 PDSS1Q5T2R2 415 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 ANO1Q5XXA6 986 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 KCTD18Q6PI47 426 aaPredicted RBP3.87□□□□□ -1.79
CCDC66-221ENST00000487739 LINGO2Q7L985 606 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 DGLUCYQ7Z3D6 616 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 TMTC1Q8IUR5 882 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 RNF113BQ8IZP6 322 aaKnown RBP3.87□□□□□ -1.79
CCDC66-221ENST00000487739 C1orf87Q8N0U7 546 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 CNBD1Q8NA66 436 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 FAM76AQ8TAV0 307 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 ABTB1Q969K4 478 aaPredicted RBP3.87□□□□□ -1.79
CCDC66-221ENST00000487739 ALG14Q96F25 216 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 MAGEE1Q9HCI5 957 aa3.87□□□□□ -1.79
CCDC66-221ENST00000487739 A0A1B0GU03 582 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 TMEM202A6NGA9 273 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 TBX6O95947 436 aaPredicted RBP3.86□□□□□ -1.79
CCDC66-221ENST00000487739 MT-CYBP00156 380 aaPredicted RBP3.86□□□□□ -1.79
CCDC66-221ENST00000487739 HEXAP06865 529 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 CYC1P08574 325 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 ZNF883P0CG24 379 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 HNRNPH2P55795 449 aaKnown RBP3.86□□□□□ -1.79
CCDC66-221ENST00000487739 SLC12A1Q13621 1099 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 EIF2S3LQ2VIR3 472 aaKnown RBP3.86□□□□□ -1.79
CCDC66-221ENST00000487739 ZCCHC9Q8N567 271 aaKnown RBP3.86□□□□□ -1.79
CCDC66-221ENST00000487739 C11orf65Q8NCR3 313 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 TAS1R2Q8TE23 839 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 DUSP19Q8WTR2 217 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 RUFY2Q8WXA3 655 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 REEP2Q9BRK0 252 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 BPIFA1Q9NP55 256 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 FAM118AQ9NWS6 357 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 FAM96BQ9Y3D0 163 aa3.86□□□□□ -1.79
CCDC66-221ENST00000487739 GOLGA6L10A0A0M3HER8 536 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 PMS2P5A8MQ11 134 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 MAOAP21397 527 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 HOXA1P49639 335 aaPredicted RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 TERF1P54274 439 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 ARL4CP56559 192 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 EFNB1P98172 346 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 HIST2H2ACQ16777 129 aaPredicted RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 SGO1Q5FBB7 561 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 WDR45BQ5MNZ6 344 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 CCNYL2Q5T2Q4 361 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 GPATCH4Q5T3I0 446 aaKnown RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 ARHGAP11AQ6P4F7 1023 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 CPLX2Q6PUV4 134 aaKnown RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 KCTD8Q6ZWB6 473 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 SUGP1Q8IWZ8 645 aaKnown RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 SLC35F3Q8IY50 421 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 CCT6BQ92526 530 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 SH3GL2Q99962 352 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 PYM1Q9BRP8 204 aaKnown RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 PHF7Q9BWX1 381 aaPredicted RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 HCFC1R1Q9NWW0 138 aa3.85□□□□□ -1.79
CCDC66-221ENST00000487739 FBXO9Q9UK97 447 aaPredicted RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 FAF1Q9UNN5 650 aaPredicted RBP3.85□□□□□ -1.79
CCDC66-221ENST00000487739 IGKV3D-15A0A087WSY6 115 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 CCDC194A0A1B0GVG4 234 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 WDR1O75083 606 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 GALTP07902 379 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 METAP2P50579 478 aaKnown RBP eCLIP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms