RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PAK4O96013 591 aaPredicted RBP11.4□□□□□ -0.58
NUP50-216ENST00000486184 LMNAP02545 664 aaKnown RBP11.4□□□□□ -0.58
NUP50-216ENST00000486184 TPSB2P20231 275 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 HNRNPA2B1P22626 353 aaKnown RBP11.4□□□□□ -0.58
NUP50-216ENST00000486184 LHCGRP22888 699 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 ITPKAP23677 461 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 MAOBP27338 520 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 PTGIRP43119 386 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 CDK16Q00536 496 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 PDE1BQ01064 536 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 OLIG2Q13516 323 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 STAT4Q14765 748 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 TEAD4Q15561 434 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 TPSAB1Q15661 275 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 ZNF284Q2VY69 593 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 RANBP10Q6VN20 620 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 LYSMD3Q7Z3D4 306 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 TSPAN33Q86UF1 283 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 SYT12Q8IV01 421 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 KLHDC8BQ8IXV7 354 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 PPIL6Q8IXY8 311 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 ZCCHC9Q8N567 271 aaKnown RBP11.4□□□□□ -0.58
NUP50-216ENST00000486184 OR52K1Q8NGK4 314 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 ASB12Q8WXK4 309 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 SKA1Q96BD8 255 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 NUS1Q96E22 293 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 SMIM14Q96QK8 99 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 MYOCQ99972 504 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 HINFPQ9BQA5 517 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 TRIM51Q9BSJ1 452 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 C1QTNF2Q9BXJ5 285 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 TRIM31Q9BZY9 425 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 RAB17Q9H0T7 212 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 RAD18Q9NS91 495 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 SHOC2Q9UQ13 582 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 UTP11Q9Y3A2 253 aaKnown RBP11.4□□□□□ -0.58
NUP50-216ENST00000486184 PKP3Q9Y446 797 aa11.4□□□□□ -0.58
NUP50-216ENST00000486184 ADAMTS9Q9P2N4 1935 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 BCAT2O15382 392 aaPredicted RBP11.39□□□□□ -0.59
NUP50-216ENST00000486184 RECQL5O94762 991 aaPredicted RBP11.39□□□□□ -0.59
NUP50-216ENST00000486184 SUN1O94901 812 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 HOXD12P35452 270 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 CALCOCO2Q13137 446 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 LAMB3Q13751 1172 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 SEPT6Q14141 434 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 LRRC14Q15048 493 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 PTPRRQ15256 657 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 KCTD19Q17RG1 926 aaPredicted RBP11.39□□□□□ -0.59
NUP50-216ENST00000486184 IZUMO3Q5VZ72 239 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 BBOF1Q8ND07 529 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 DENND6BQ8NEG7 585 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 CEP76Q8TAP6 659 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 DNASE2BQ8WZ79 361 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 SNF8Q96H20 258 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 ARNT2Q9HBZ2 717 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 FZD3Q9NPG1 666 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.39□□□□□ -0.59
NUP50-216ENST00000486184 NEU2Q9Y3R4 380 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 PCDHGA5Q9Y5G8 931 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 MUC6Q6W4X9 2439 aa11.39□□□□□ -0.59
NUP50-216ENST00000486184 TMEM131Q92545 1883 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 PI4KAP42356 2102 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 A0A0U1RQS6 177 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 A0A1B0GTW7 788 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 A6NNZ2 444 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 SMAPO00193 183 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 DNALI1O14645 258 aaPredicted RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 STX7O15400 261 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 RAD51CO43502 376 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 MAGEC1O60732 1142 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 CFIP05156 583 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 PCCBP05166 539 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 RETP07949 1114 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 C1SP09871 688 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 TPH1P17752 444 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 MPLP40238 635 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 ETV3P41162 512 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 AFF3P51826 1226 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 STC1P52823 247 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 C21orf59P57076 290 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 RACK1P63244 317 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 NHLH1Q02575 133 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 PTSQ03393 145 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 KCNJ11Q14654 390 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 POU6F1Q14863 301 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 AGERQ15109 404 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 TAF1AQ15573 450 aaPredicted RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 DUOXA1Q1HG43 343 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 HSD11B1LQ7Z5J1 315 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 PTAR1Q7Z6K3 402 aaPredicted RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 HOOK3Q86VS8 718 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 RAVER1Q8IY67 606 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 PPHLN1Q8NEY8 458 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 FAM174AQ8TBP5 190 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 BRSK1Q8TDC3 778 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 CPT1BQ92523 772 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 COQ10AQ96MF6 247 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 SLC6A18Q96N87 628 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 LENG8Q96PV6 779 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms