RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SETMARQ53H47 684 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 SLC45A4Q5BKX6 768 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ERMARDQ5T6L9 678 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ZDHHC24Q6UX98 284 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 Q6ZSR6 202 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ERN2Q76MJ5 926 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 BZW1Q7L1Q6 419 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 GSTA5Q7RTV2 222 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 DSG4Q86SJ6 1040 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 PYROXD2Q8N2H3 581 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 CCDC185Q8N715 623 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 DCAF4L2Q8NA75 395 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TSEN2Q8NCE0 465 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TMIEQ8NEW7 156 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM172AQ8WUF8 416 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 C1orf74Q96LT6 269 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TRIM31Q9BZY9 425 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 KLC2Q9H0B6 622 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 OSBPL2Q9H1P3 480 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TCEAL2Q9H3H9 227 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 PCDH9Q9HC56 1237 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 PREBQ9HCU5 417 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ATP13A1Q9HD20 1204 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 PSD3Q9NYI0 1048 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 IL36AQ9UHA7 158 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 NEU3Q9UQ49 428 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ZNF148Q9UQR1 794 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 DMTF1Q9Y222 760 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 R3HDM2Q9Y2K5 976 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 FADS3Q9Y5Q0 445 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 AK5Q9Y6K8 562 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 U3KQA8 63 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 SHROOM3Q8TF72 1996 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TRPM6Q9BX84 2022 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 COL27A1Q8IZC6 1860 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 IGLON5A6NGN9 336 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 HMGB1P1B2RPK0 211 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 H3BQF6 201 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 BRINP1O60477 761 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 CST8O60676 142 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 PIAS2O75928 621 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 F9P00740 461 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 KRT14P02533 472 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 NUDT17P0C025 328 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 KRT10P13645 584 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 IVDP26440 423 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 KCNJ1P48048 391 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 NR2C2P49116 596 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 SERPINH1P50454 418 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 CDH6P55285 790 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 OXCT1P55809 520 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 PRSS12P56730 875 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 GNA12Q03113 381 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 MORF4L2Q15014 288 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 DPYSL2Q16555 572 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 INAVAQ3KP66 663 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 TMEM259Q4ZIN3 620 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 CARD16Q5EG05 197 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 ATXN7L2Q5T6C5 722 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 MANEALQ5VSG8 457 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 KAZNQ674X7 775 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 TXNRD3NBQ6F5E7 133 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 LRRC31Q6UY01 552 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 PARS2Q7L3T8 475 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 ABI3BPQ7Z7G0 1075 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 NLRP14Q86W24 1093 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 RFX6Q8HWS3 928 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 FBXO25Q8TCJ0 367 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 ATG4AQ8WYN0 398 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 HAUS1Q96CS2 278 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 FAF2Q96CS3 445 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 NAF1Q96HR8 494 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 APOLD1Q96LR9 279 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 GDAP1L1Q96MZ0 367 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 ZIM3Q96PE6 472 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 RNF157Q96PX1 679 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 HAPLN3Q96S86 360 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 HERPUD2Q9BSE4 406 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 C2orf49Q9BVC5 232 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 TMEM109Q9BVC6 243 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 ZYG11BQ9C0D3 744 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 ZDHHC6Q9H6R6 413 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 KLHL11Q9NVR0 708 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 PCSK1NQ9UHG2 260 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 ANAPC5Q9UJX4 755 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 DNPEPQ9ULA0 475 aa9.47□□□□□ -0.89
TMEM39A-208ENST00000486159 CHD5Q8TDI0 1954 aa9.46□□□□□ -0.89
TMEM39A-208ENST00000486159 PTPN13Q12923 2485 aa9.46□□□□□ -0.89
TMEM39A-208ENST00000486159 ITPR1Q14643 2758 aa9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 A0A1W2PNU3 283 aaPredicted RBP9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 ILVBLA1L0T0 632 aa9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 PMS2P1A4D2B8 440 aa9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 GOLGA6CA6NDK9 693 aa9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 TK2O00142 265 aa9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 APOL1O14791 398 aa9.46□□□□□ -0.9
TMEM39A-208ENST00000486159 YKT6O15498 198 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms