RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
DDX56-212ENST00000485367 SPON2Q9BUD6 331 aa10.84□□□□□ -0.67
DDX56-212ENST00000485367 C2orf49Q9BVC5 232 aaPredicted RBP10.84□□□□□ -0.67
DDX56-212ENST00000485367 TRIM4Q9C037 500 aa10.84□□□□□ -0.67
DDX56-212ENST00000485367 RAB6CQ9H0N0 254 aa10.84□□□□□ -0.67
DDX56-212ENST00000485367 HAO1Q9UJM8 370 aa10.84□□□□□ -0.67
DDX56-212ENST00000485367 ANGPTL2Q9UKU9 493 aa10.84□□□□□ -0.67
DDX56-212ENST00000485367 IGLV3-10A0A075B6K4 115 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 A0A0D9SEW6 157 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 SPAARA0A1B0GVQ0 90 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 LRRC72A6NJI9 287 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 C2CD4BA6NLJ0 364 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 SIGLEC16A6NMB1 481 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 UPK3BL1B0FP48 263 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 UPK3BL2E5RIL1 263 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 CCDC22O60826 627 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 RNF8O76064 485 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 ENDOD1O94919 500 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 MT-CO1P00395 513 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 CALB1P05937 261 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 IGHV4-34P06331 123 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 PYGBP11216 843 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 KRT3P12035 628 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 GM2AP17900 193 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 SLC1A1P43005 524 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 VASPP50552 380 aaPredicted RBP10.83□□□□□ -0.68
DDX56-212ENST00000485367 WDR4P57081 412 aaKnown RBP10.83□□□□□ -0.68
DDX56-212ENST00000485367 TEAD4Q15561 434 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 HLA-BQ31612 363 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 ARL13BQ3SXY8 428 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.83□□□□□ -0.68
DDX56-212ENST00000485367 Q6ZVU0 165 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 DSG4Q86SJ6 1040 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 SETD3Q86TU7 594 aaPredicted RBP10.83□□□□□ -0.68
DDX56-212ENST00000485367 ATP11CQ8NB49 1132 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 OR14C36Q8NHC7 312 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 RBM41Q96IZ5 413 aaKnown RBP10.83□□□□□ -0.68
DDX56-212ENST00000485367 NR1H4Q96RI1 486 aaPredicted RBP10.83□□□□□ -0.68
DDX56-212ENST00000485367 ZYG11BQ9C0D3 744 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 DENND2DQ9H6A0 471 aaPredicted RBP10.83□□□□□ -0.68
DDX56-212ENST00000485367 GAREM1Q9H706 876 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 IL21RQ9HBE5 538 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 TM9SF3Q9HD45 589 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 VPS51Q9UID3 782 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 FZD4Q9ULV1 537 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 CABIN1Q9Y6J0 2220 aa10.83□□□□□ -0.68
DDX56-212ENST00000485367 TCRBV7S2A1N4TA0A589 114 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 TMEM110-MUSTN1A8MSY1 372 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 PLK4O00444 970 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 SH3BP5O60239 455 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 GJB3O75712 270 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 CER1O95813 267 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 SRCP12931 536 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 RFC1P35251 1148 aaPredicted RBP10.82□□□□□ -0.68
DDX56-212ENST00000485367 ADRA1BP35368 520 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 PTPN9P43378 593 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 KCNJ1P48048 391 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 METAP1P53582 386 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 SIM1P81133 766 aaPredicted RBP10.82□□□□□ -0.68
DDX56-212ENST00000485367 SLC14A1Q13336 389 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 CUL3Q13618 768 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 KIF19Q2TAC6 998 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 POM121L1PQ3SYA9 428 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 FAM46CQ5VWP2 391 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 DNAJC24Q6P3W2 148 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 IL27RAQ6UWB1 636 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 LAYNQ6UX15 382 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 LINGO4Q6UY18 593 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 CYP4X1Q8N118 509 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 OR7D4Q8NG98 312 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 OR2T34Q8NGX1 318 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 FAM172AQ8WUF8 416 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 CAMK1GQ96NX5 476 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 SMC6Q96SB8 1091 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 NUP85Q9BW27 656 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 MLXIPLQ9NP71 852 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 NMRK1Q9NWW6 199 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 ZNF212Q9UDV6 495 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 ZFP69BQ9UJL9 534 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX56-212ENST00000485367 SNX11Q9Y5W9 270 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 PLXNA2O75051 1894 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 EPG5Q9HCE0 2579 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 MAP1BP46821 2468 aaKnown RBP10.82□□□□□ -0.68
DDX56-212ENST00000485367 TMEM131Q92545 1883 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 ILVBLA1L0T0 632 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 K7ERQ8 282 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 CBX4O00257 560 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 MCF2LO15068 1137 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 PDHA1P08559 390 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 TROVE2P10155 538 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX56-212ENST00000485367 GPD1P21695 349 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 GLDCP23378 1020 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 RRM1P23921 792 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 EPHB2P29323 1055 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 ADPRHP54922 357 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 SLC34A1Q06495 639 aa10.82□□□□□ -0.68
DDX56-212ENST00000485367 LRRC23Q53EV4 343 aaPredicted RBP10.82□□□□□ -0.68
DDX56-212ENST00000485367 ARTNQ5T4W7 220 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms