RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 RXRGP48443 463 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 STC1P52823 247 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 MTM1Q13496 603 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 OASLQ15646 514 aaKnown RBP13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 ZNF569Q5MCW4 686 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 ITPRIPL1Q6GPH6 555 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 DBX2Q6ZNG2 339 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 Q6ZVL8 140 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 TECPR1Q7Z6L1 1165 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 GATAD2AQ86YP4 633 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 DCP2Q8IU60 420 aaKnown RBP13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 NAXDQ8IW45 347 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 OXR1Q8N573 874 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 FAM71DQ8N9W8 422 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 DEFB124Q8NES8 71 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 SAP25Q8TEE9 199 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 C1orf54Q8WWF1 131 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 IFT43Q96FT9 208 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 CAMK1GQ96NX5 476 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 FERMT1Q9BQL6 677 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 PNMA8BQ9ULN7 279 aaPredicted RBP13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 BTBD3Q9Y2F9 522 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 OR1A2Q9Y585 309 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 PCDHGB2Q9Y5G2 931 aa13.58□□□□□ -0.24
SOX2-OT-209ENST00000485035 DCHS1Q96JQ0 3298 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 ADAMTS9Q9P2N4 1935 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 C1orf232A0A0U1RR37 186 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 C5orf60A6NFR6 353 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 K7ESM1 405 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 TOR1BO14657 336 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 GIPC1O14908 333 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 YKT6O15498 198 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 CEP104O60308 925 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 SDC3O75056 442 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 NDST3O95803 873 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 FGGP02679 453 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 ATP1A1P05023 1023 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 CSRP1P21291 193 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 CHRNA4P43681 627 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 YPEL5P62699 121 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 BNIP3Q12983 259 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 EIF2B5Q13144 721 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 MPP3Q13368 585 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 ZNF542PQ5EBM4 170 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 ESRP1Q6NXG1 681 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 PNCKQ6P2M8 343 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 KANSL1Q7Z3B3 1105 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 LYSMD3Q7Z3D4 306 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 PARGQ86W56 976 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 IPMKQ8NFU5 416 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 EID2BQ96D98 161 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 APOOQ9BUR5 198 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 FRMD8P1Q9BZ68 369 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 DNAJC28Q9NX36 388 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 KLF15Q9UIH9 416 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 SPO11Q9Y5K1 396 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 GON4LQ3T8J9 2241 aa13.57□□□□□ -0.24
SOX2-OT-209ENST00000485035 FLRT2O43155 660 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 KIF5CO60282 957 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 CBFA2T3O75081 653 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 GCATO75600 419 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 ZNF189O75820 626 aaPredicted RBP13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 KCNK5O95279 499 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 SOD1P00441 154 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 EPOP01588 193 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 CSF2P04141 144 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 TRIM23P36406 574 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 THOP1P52888 689 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 GEMP55040 296 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 OLIG2Q13516 323 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 SNX1Q13596 522 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 SLC1A5Q15758 541 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 SIRPB2Q5JXA9 342 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 KCTD16Q68DU8 428 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 PSAPL1Q6NUJ1 521 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 MACC1Q6ZN28 852 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 DGLUCYQ7Z3D6 616 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 SLC25A41Q8N5S1 370 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 SCAMP4Q969E2 229 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 FUBP1Q96AE4 644 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 ABCG8Q9H221 673 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 KCTD5Q9NXV2 234 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 CD84Q9UIB8 345 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 PCOLCE2Q9UKZ9 415 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 SHOC2Q9UQ13 582 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 ZNF711Q9Y462 761 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 ANKRD36A6QL64 1941 aa13.56□□□□□ -0.24
SOX2-OT-209ENST00000485035 PIAS2O75928 621 aa13.55□□□□□ -0.24
SOX2-OT-209ENST00000485035 ANXA9O76027 345 aa13.55□□□□□ -0.24
SOX2-OT-209ENST00000485035 METTL18O95568 372 aa13.55□□□□□ -0.24
SOX2-OT-209ENST00000485035 AGTP01019 485 aa13.55□□□□□ -0.24
SOX2-OT-209ENST00000485035 ITGAVP06756 1048 aa13.55□□□□□ -0.24
SOX2-OT-209ENST00000485035 CEACAM1P13688 526 aa13.55□□□□□ -0.24
SOX2-OT-209ENST00000485035 NME1P15531 152 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms