RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 HIST2H2ACQ16777 129 aaPredicted RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 GPATCH4Q5T3I0 446 aaKnown RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 RGMBQ6NW40 437 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 SLC36A4Q6YBV0 504 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 SLC9B2Q86UD5 537 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 TTC14Q96N46 770 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 PYM1Q9BRP8 204 aaKnown RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 TRMT61BQ9BVS5 477 aaKnown RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 LMAN2LQ9H0V9 348 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 SNTG1Q9NSN8 517 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 FAM118AQ9NWS6 357 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 CTNNAL1Q9UBT7 734 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 CNOT7Q9UIV1 285 aaKnown RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 FBXO9Q9UK97 447 aaPredicted RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 RRN3P2A6NIE6 340 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 J3KRW8 73 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 MID1O15344 667 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 BCAT2O15382 392 aaPredicted RBP4.13□□□□□ -1.75
SMC4-215ENST00000484799 SLC22A3O75751 556 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 CDKN1AP38936 164 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 PDE1BQ01064 536 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 ILF3Q12906 894 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMC4-215ENST00000484799 PDSS1Q5T2R2 415 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 RRM2BQ7LG56 351 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 C11orf65Q8NCR3 313 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 LNX1Q8TBB1 728 aaPredicted RBP4.13□□□□□ -1.75
SMC4-215ENST00000484799 EYA3Q99504 573 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 NDST4Q9H3R1 872 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 TTC7AQ9ULT0 858 aaPredicted RBP4.13□□□□□ -1.75
SMC4-215ENST00000484799 ITIH6Q6UXX5 1313 aa4.13□□□□□ -1.75
SMC4-215ENST00000484799 CCDC196A0A1B0GTZ2 297 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 ASPDHA6ND91 283 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 TTC36A6NLP5 189 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 PLRG1O43660 514 aaKnown RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 PYGLP06737 847 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 CNPP09543 421 aaKnown RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 CDH1P12830 882 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 XBP1P17861 261 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 USP8P40818 1118 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 FUT6P51993 359 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 CRIP2P52943 208 aaPredicted RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 GEMIN4P57678 1058 aaKnown RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 ERVK11-1P61568 191 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 TLE2Q04725 743 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 TCTN1Q2MV58 587 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 MMEL1Q495T6 779 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 SETMARQ53H47 684 aaPredicted RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 KCNT1Q5JUK3 1230 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 HYIQ5T013 277 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 PLA2G4FQ68DD2 849 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 TRNP1Q6NT89 227 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 SLC22A25Q6T423 547 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 TAOK1Q7L7X3 1001 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 KMT5CQ86Y97 462 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMC4-215ENST00000484799 RNF113BQ8IZP6 322 aaKnown RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 BEST2Q8NFU1 509 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 RUFY2Q8WXA3 655 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 RND1Q92730 232 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 SEC62Q99442 399 aaKnown RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 FKRPQ9H9S5 495 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 FBRSL1Q9HCM7 1045 aaKnown RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 GPR108Q9NPR9 543 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 WASH6PQ9NQA3 447 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 MCM9Q9NXL9 1143 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 MAP3K20Q9NYL2 800 aaKnown RBP4.12□□□□□ -1.75
SMC4-215ENST00000484799 TAAR2Q9P1P5 351 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 KIAA1456Q9P272 454 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 AMDHD2Q9Y303 409 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 ZNF711Q9Y462 761 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 SCINQ9Y6U3 715 aa4.12□□□□□ -1.75
SMC4-215ENST00000484799 A0A0U1RQF3 1178 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 FAM90A7PA6NKC0 464 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 FAM90A22PA8MWA6 464 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 FAM90A12PA8MX19 464 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 FAM90A23PA8MXZ1 464 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 NTN3O00634 580 aaPredicted RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 MMP2P08253 660 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 G6PDP11413 515 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 CLCNKAP51800 687 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 RAD23BP54727 409 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 CDH15P55291 814 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 CLDN2P57739 230 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 VAMP2P63027 116 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 EEF1A1P68104 462 aaKnown RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 SIM2Q14190 667 aaPredicted RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 EFNB3Q15768 340 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 KRT24Q2M2I5 525 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 WDR45BQ5MNZ6 344 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 PAPPA-AS1Q5QFB9 102 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 EEF1A1P5Q5VTE0 462 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 LRRC8EQ6NSJ5 796 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 KCTD18Q6PI47 426 aaPredicted RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 C19orf48Q6RUI8 117 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 C17orf99Q6UX52 265 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 RSRC2Q7L4I2 434 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms