RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 DPH1Q9BZG8 443 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 SEMA4CQ9C0C4 833 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 CBX8Q9HC52 389 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 MRPL47Q9HD33 250 aaKnown RBP18.04■□□□□ 0.48
ATG4B-221ENST00000483778 NPIPB15A6NHN6 443 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-221ENST00000483778 D6RAR5 112 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 TNFRSF10CO14798 259 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 HEXIM1O94992 359 aaKnown RBP18.03■□□□□ 0.48
ATG4B-221ENST00000483778 SERPINC1P01008 464 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 CEACAM5P06731 702 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 PDHA1P08559 390 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 MYBL1P10243 752 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 CTPS1P17812 591 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 VIPR1P32241 457 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 UGT1A5P35504 534 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 ARL4AP40617 200 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 ETV3P41162 512 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 POLD2P49005 469 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 FANCCQ00597 558 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 C19orf57Q0VDD7 668 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 SRSF6Q13247 344 aaKnown RBP18.03■□□□□ 0.48
ATG4B-221ENST00000483778 CLN3Q13286 438 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 ZNF235Q14590 738 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 FAM182AQ5T1J6 154 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 Q6ZVL8 140 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 LUZP1Q86V48 1076 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 CCNJLQ8IV13 435 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 ATL2Q8NHH9 583 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 LIN37Q96GY3 246 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-221ENST00000483778 MGME1Q9BQP7 344 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 PLEKHM1Q9Y4G2 1056 aa18.03■□□□□ 0.48
ATG4B-221ENST00000483778 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-221ENST00000483778 PRSS38A1L453 326 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 B4DGG1 531 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 PLD2O14939 933 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 B4GAT1O43505 415 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 CPP00450 1065 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 CYP1A2P05177 515 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 KRT10P13645 584 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 SLC5A2P31639 672 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 ARSEP51690 589 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 ZNF135P52742 658 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-221ENST00000483778 MAZP56270 477 aaKnown RBP18.02■□□□□ 0.48
ATG4B-221ENST00000483778 VAC14Q08AM6 782 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 HLTFQ14527 1009 aaKnown RBP eCLIP18.02■□□□□ 0.48
ATG4B-221ENST00000483778 TGIF1Q15583 401 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 FIGNQ5HY92 759 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 CERCAMQ5T4B2 595 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 KIAA1614Q5VZ46 1190 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 SPECC1LQ69YQ0 1117 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 RAB11FIP2Q7L804 512 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 HEATR4Q86WZ0 1026 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 FBXO39Q8N4B4 442 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 WDR48Q8TAF3 677 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 PIH1D2Q8WWB5 315 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 SPOCK2Q92563 424 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 NUS1Q96E22 293 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 TRIM11Q96F44 468 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 NUP85Q9BW27 656 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 TEX101Q9BY14 249 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 DPEP2Q9H4A9 486 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 WDR26Q9H7D7 661 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 NT5MQ9NPB1 228 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 LRIT1Q9P2V4 623 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 APPL1Q9UKG1 709 aa18.02■□□□□ 0.48
ATG4B-221ENST00000483778 PGLSO95336 258 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 MAP3K6O95382 1288 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 FGF1P05230 155 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 GLB1P16278 677 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 AK4P27144 223 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 ETV5P41161 510 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 MMP13P45452 471 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 INHBCP55103 352 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 B4GALNT1Q00973 533 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 ZFP36L1Q07352 338 aaKnown RBP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 LY6DQ14210 128 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 PIGHQ14442 188 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 C14orf28Q4W4Y0 310 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 TDRD12Q587J7 1177 aaKnown RBP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 SPRED1Q7Z699 444 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 ARL14Q8N4G2 192 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 NIPA2Q8N8Q9 360 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 LSM14AQ8ND56 463 aaKnown RBP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 GPBAR1Q8TDU6 330 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 SNRNP27Q8WVK2 155 aaKnown RBP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 TEKT4Q8WW24 435 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 PATE1Q8WXA2 126 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 TTC9Q92623 222 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 DTD2Q96FN9 168 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 FRMD8Q9BZ67 464 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-221ENST00000483778 ANAPC7Q9UJX3 599 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 PHTF1Q9UMS5 762 aa18.01■□□□□ 0.47
ATG4B-221ENST00000483778 SDK2Q58EX2 2172 aa18■□□□□ 0.47
ATG4B-221ENST00000483778 SOCS5O75159 536 aa18■□□□□ 0.47
ATG4B-221ENST00000483778 ITGA2BP08514 1039 aa18■□□□□ 0.47
ATG4B-221ENST00000483778 MYCLP1P12525 358 aaPredicted RBP18■□□□□ 0.47
ATG4B-221ENST00000483778 ITIH1P19827 911 aa18■□□□□ 0.47
ATG4B-221ENST00000483778 CDH6P55285 790 aa18■□□□□ 0.47
ATG4B-221ENST00000483778 OR1D5P58170 312 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms