RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 POLR1BQ9H9Y6 1135 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 FAM105AQ9NUU6 356 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ARMC1Q9NVT9 282 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 CORINQ9Y5Q5 1042 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 MAGEB16A2A368 324 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 FUOMA2VDF0 154 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 K7EPI3 171 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 GPC4O75487 556 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 ITGB1P05556 798 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 ZNF182P17025 639 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 HMOX2P30519 316 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 CD300CQ08708 224 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 SCAPQ12770 1279 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 CDH17Q12864 832 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 NEDD8Q15843 81 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC36A3Q495N2 470 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 TRPC4APQ8TEL6 797 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 COX4I2Q96KJ9 171 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 CNGB3Q9NQW8 809 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 IGSF5Q9NSI5 407 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 TBC1D23Q9NUY8 699 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 MAP10Q9P2G4 905 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 PAIP2BQ9ULR5 123 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 COQ6Q9Y2Z9 468 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 TTC3P53804 2025 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 RNF103-CHMP3A0A140T963 221 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 A8MT66 165 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 B4GAT1O43505 415 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 SERPINB7O75635 380 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 CHRNA1P02708 482 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 MT-ND1P03886 318 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 THP07101 528 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 POLR2IP36954 125 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 HADHAP40939 763 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 RXRGP48443 463 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 ARCN1P48444 511 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 CXCR3P49682 368 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 DCLRE1AQ6PJP8 1040 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 CXCL17Q6UXB2 119 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 RNF168Q8IYW5 571 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 MFSD2AQ8NA29 543 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 ERLEC1Q96DZ1 483 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC9A7Q96T83 725 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 MRPL40Q9NQ50 206 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 AGPAT4Q9NRZ5 378 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 CCM2LQ9NUG4 571 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC45A1Q9Y2W3 748 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 RALGAPA2Q2PPJ7 1873 aa13.34□□□□□ -0.27
PDZRN3-208ENST00000479530 DHRS12A0PJE2 317 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 TRIM64A6NGJ6 449 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 GLTPD2A6NH11 291 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 ADAM23O75077 832 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 ATP5F1P24539 256 aaPredicted RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 BMXP51813 675 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 C21orf59P57076 290 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 PLCL1Q15111 1095 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 FSCN1Q16658 493 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 KCTD8Q6ZWB6 473 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 CAMK1DQ8IU85 385 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 CENPSQ8N2Z9 138 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 DQX1Q8TE96 717 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 HDAC11Q96DB2 347 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 PARK7Q99497 189 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 OLFM1Q99784 485 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 MRPL57Q9BQC6 102 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC25A23Q9BV35 468 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 TUBA8Q9NY65 449 aaPredicted RBP13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 NEU3Q9UQ49 428 aa13.33□□□□□ -0.27
PDZRN3-208ENST00000479530 ANKRD12Q6UB98 2062 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 MYLKQ15746 1914 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 EI24O14681 340 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 ACOX3O15254 700 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 MGEA5O60502 916 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 CBFA2T3O75081 653 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 OCM2P0CE71 109 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 OCMP0CE72 109 aaPredicted RBP13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 DCKP27707 260 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 CHRNA4P43681 627 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 MAPRE2Q15555 327 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 ARTNQ5T4W7 220 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 BTBD8Q5XKL5 378 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 ZNF470Q6ECI4 717 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 ANKRD26P1Q6NSI1 321 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 IPMKQ8NFU5 416 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 TSC2P49815 1807 aa13.33□□□□□ -0.28
PDZRN3-208ENST00000479530 TTC24A2A3L6 582 aaPredicted RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 ERI2A8K979 691 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 ZNF701M0R085 212 aaPredicted RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PPP6CO00743 305 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 B3GAT3O94766 335 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms