RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PLA2G4CQ9UP65 541 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 LRCH1Q9Y2L9 728 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 GIT1Q9Y2X7 761 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 PCDHB12Q9Y5F1 795 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 CDY2AQ9Y6F7 541 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 CDY1Q9Y6F8 540 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 A0A096LPK6 155 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ZCWPW2A0A1B0GU75 182 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MYBPHLA2RUH7 354 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FAM221BA6H8Z2 402 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ARHGAP42A6NI28 874 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 YJEFN3A6XGL0 299 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 PRR5-ARHGAP8B1AHC4 643 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 HHLA1C9JL84 531 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FAM72CH0Y354 149 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 KCNK1O00180 336 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FGF10O15520 208 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ITM2AO43736 263 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CACNG3O60359 315 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 TRIM13O60858 407 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 LYPLA1O75608 230 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 KRT36O76013 467 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ANXA9O76027 345 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 BPNT1O95861 308 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 TOP3BO95985 862 aaKnown RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 PRKCGP05129 697 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 C6orf222P0C671 652 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ERVK-10P10266 1014 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ODC1P11926 461 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 COL6A2P12110 1019 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 NCAM1P13591 858 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 RGS2P41220 211 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CPA2P48052 419 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 RAB27AP51159 221 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 COPAP53621 1224 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ACTR3P61158 418 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 AP2B1P63010 937 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ARHGAP8P85298 464 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 PURAQ00577 322 aaKnown RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 KDSRQ06136 332 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 KLC1Q07866 573 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ASPHQ12797 758 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CDH17Q12864 832 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MPP3Q13368 585 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ITGA9Q13797 1035 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MAPRE1Q15691 268 aaKnown RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FSCN1Q16658 493 aaKnown RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 UGP2Q16851 508 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ANO4Q32M45 955 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FSCBQ5H9T9 825 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CFAP157Q5JU67 520 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 BRMS1LQ5PSV4 323 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 RABGAP1LQ5R372 815 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FAM72AQ5TYM5 149 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 RASIP1Q5U651 963 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 SNX30Q5VWJ9 437 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 PDPK2PQ6A1A2 396 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 PM20D1Q6GTS8 502 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FAM72DQ6L9T8 149 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 IRGCQ6NXR0 463 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 AAGABQ6PD74 315 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 BHLHA9Q7RTU4 235 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 STRA8Q7Z7C7 330 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MRPL10Q7Z7H8 261 aaKnown RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ADGRG6Q86SQ4 1221 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CLEC14AQ86T13 490 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 KCNMB4Q86W47 210 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FAM72BQ86X60 149 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MYLK4Q86YV6 388 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 C10orf107Q8IVU9 208 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 SLITRK4Q8IW52 837 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CCDC117Q8IWD4 279 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ULK2Q8IYT8 1036 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 LZTR1Q8N653 840 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FAM169BQ8N8A8 192 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 RNF169Q8NCN4 708 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ZMIZ2Q8NF64 920 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 OR6Y1Q8NGX8 325 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 URGCPQ8TCY9 931 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 WDR60Q8WVS4 1066 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 SOCS4Q8WXH5 440 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 GATAD2BQ8WXI9 593 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 JADE3Q92613 823 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MYLPFQ96A32 169 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CMTM5Q96DZ9 223 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 PCED1BQ96HM7 432 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 TEKT5Q96M29 485 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF778Q96MU6 729 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 AGAP3Q96P47 875 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 GAD1Q99259 594 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 SORT1Q99523 831 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 GORASP1Q9BQQ3 440 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 EBF4Q9BQW3 602 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ACBD6Q9BR61 282 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MTG1Q9BT17 334 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 THTPAQ9BU02 230 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MLPHQ9BV36 600 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 COLEC11Q9BWP8 271 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 C20orf27Q9GZN8 174 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CDH19Q9H159 772 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms