RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 SGF29Q96ES7 293 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 TRIM11Q96F44 468 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 COQ10AQ96MF6 247 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 LGR4Q9BXB1 951 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 GSDMCQ9BYG8 508 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 HSD3B7Q9H2F3 369 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 CARS2Q9HA77 564 aaKnown RBP13.14□□□□□ -0.31
PABPC4-212ENST00000477556 CWC15Q9P013 229 aaKnown RBP13.14□□□□□ -0.31
PABPC4-212ENST00000477556 PCDHB11Q9Y5F2 797 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
PABPC4-212ENST00000477556 LRRC53A6NM62 1247 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 RHPN2P1A8MT19 583 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 AGRPO00253 132 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 EFSO43281 561 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 HTRA2O43464 458 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 LRCH4O75427 683 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 CPNE6O95741 557 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 CPP00450 1065 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 ITIH1P19827 911 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 MAPK10P53779 464 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 ILF3Q12906 894 aaKnown RBP eCLIP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 PEX6Q13608 980 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 DPYSQ14117 519 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 TGIF1Q15583 401 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 CNGA3Q16281 694 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 TMEM164Q5U3C3 297 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 DENND2CQ68D51 928 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 TMCO3Q6UWJ1 677 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 XKR5Q6UX68 686 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 CYP4V2Q6ZWL3 525 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 PIM3Q86V86 326 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 HEATR4Q86WZ0 1026 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 SFTPA2Q8IWL1 248 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 GPBAR1Q8TDU6 330 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 ZDHHC1Q8WTX9 485 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 NSMCE3Q96MG7 304 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 TRIM7Q9C029 511 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 HAUS4Q9H6D7 363 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 SUDS3Q9H7L9 328 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 MRPL47Q9HD33 250 aaKnown RBP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 TRNAU1APQ9NX07 287 aaKnown RBP13.13□□□□□ -0.31
PABPC4-212ENST00000477556 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 PHTF1Q9UMS5 762 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 PCDHGC4Q9Y5F7 938 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 KALRNO60229 2985 aa13.13□□□□□ -0.31
PABPC4-212ENST00000477556 TTC24A2A3L6 582 aaPredicted RBP13.12□□□□□ -0.31
PABPC4-212ENST00000477556 GOLGA6CA6NDK9 693 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 PSMD11O00231 422 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 SLC28A2O43868 658 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 GOLGA6DP0CG33 693 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 MYBL1P10243 752 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 CD82P27701 267 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 PCK1P35558 622 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
PABPC4-212ENST00000477556 ETV5P41161 510 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 GNPDA1P46926 289 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
PABPC4-212ENST00000477556 B4GALNT1Q00973 533 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 KLHL30Q0D2K2 578 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 DPYSL2Q16555 572 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 CLPPQ16740 277 aaPredicted RBP13.12□□□□□ -0.31
PABPC4-212ENST00000477556 AMZ1Q400G9 498 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 BOLA3Q53S33 107 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 RALGPS1Q5JS13 557 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 CCDC183Q5T5S1 534 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 ZNF571Q7Z3V5 609 aaPredicted RBP13.12□□□□□ -0.31
PABPC4-212ENST00000477556 SLITRK4Q8IW52 837 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 TP53INP2Q8IXH6 220 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 PELI3Q8N2H9 469 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 ATPAF2Q8N5M1 289 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 ZSCAN1Q8NBB4 408 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 USP7Q93009 1102 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 DTD2Q96FN9 168 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 TEX101Q9BY14 249 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 NOD2Q9HC29 1040 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
PABPC4-212ENST00000477556 SPATS2LQ9NUQ6 558 aaKnown RBP13.12□□□□□ -0.31
PABPC4-212ENST00000477556 GOLGA6AQ9NYA3 693 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 AIPL1Q9NZN9 384 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 TAAR2Q9P1P5 351 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
PABPC4-212ENST00000477556 ARHGEF17Q96PE2 2063 aaPredicted RBP13.11□□□□□ -0.31
PABPC4-212ENST00000477556 PRAMEF33A0A0G2JMD5 474 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 A0A1W2PQC6 194 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 SMTNL1A8MU46 457 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 DDX3XO00571 662 aaKnown RBP eCLIP13.11□□□□□ -0.31
PABPC4-212ENST00000477556 B4GAT1O43505 415 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 PRAMEF10O60809 474 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 ITGB2P05107 769 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 CEACAM5P06731 702 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 KRT10P13645 584 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 CR2P20023 1033 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 AMPD1P23109 780 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 ALDH4A1P30038 563 aa13.11□□□□□ -0.31
PABPC4-212ENST00000477556 SERPINB6P35237 376 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms