RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TCEAL2Q9H3H9 227 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 RBM22Q9NW64 420 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 TFR2Q9UP52 801 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 CPED1A4D0V7 1026 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 PPP1R12AO14974 1030 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-205ENST00000476387 TCEA3O75764 348 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 ALPIP09923 528 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 KRT10P13645 584 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 TSHRP16473 764 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 CA4P22748 312 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 CES1P23141 567 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 HTR1BP28222 390 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 CDC25BP30305 580 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 LSSP48449 732 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 HK3P52790 923 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 DYNLT1P63172 113 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 TRAF2Q12933 501 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 RALGDSQ12967 914 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 NFATC4Q14934 902 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 PDK1Q15118 436 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 SLC9A4Q6AI14 798 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 C11orf63Q6NUN7 778 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 LVRNQ6Q4G3 990 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 LIPIQ6XZB0 460 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 SLC35F3Q8IY50 421 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 NDUFAF2Q8N183 169 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL1A1-205ENST00000476387 WDR48Q8TAF3 677 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 CALR3Q96L12 384 aaKnown RBP16.23■□□□□ 0.19
COL1A1-205ENST00000476387 NSMCE3Q96MG7 304 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 GOLPH3Q9H4A6 298 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 POLR1BQ9H9Y6 1135 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 IMPACTQ9P2X3 320 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 B4GALT6Q9UBX8 382 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 PHTF1Q9UMS5 762 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL1A1-205ENST00000476387 ALG6Q9Y672 507 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 RP1P56715 2156 aa16.23■□□□□ 0.19
COL1A1-205ENST00000476387 SMG1Q96Q15 3661 aaKnown RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 YY2O15391 372 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 USP12O75317 370 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 RASGRP1O95267 797 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 PGLSO95336 258 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 PCCBP05166 539 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 HLA-DQB2P05538 268 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 CYP2A6P11509 494 aaPredicted RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 TGM2P21980 687 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 ITPKBP27987 946 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 VIPR1P32241 457 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 PPIDQ08752 370 aaKnown RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 SLC10A2Q12908 348 aaPredicted RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 MTM1Q13496 603 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 C1orf61Q13536 156 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 COL9A2Q14055 689 aaPredicted RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 TFDP2Q14188 446 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 INPP5AQ14642 412 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 ACOX1Q15067 660 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 ELOCQ15369 112 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 ISXQ2M1V0 245 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 ALG1LQ6GMV1 187 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 ESRP1Q6NXG1 681 aaKnown RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 IGF2-ASQ6U949 168 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 MFSD7Q6UXD7 560 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 USP45Q70EL2 814 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 DAAM2Q86T65 1068 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 LRRN4Q8WUT4 740 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 SCG3Q8WXD2 468 aaKnown RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 LGMNQ99538 433 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 BAG1Q99933 345 aaPredicted RBP16.22■□□□□ 0.19
COL1A1-205ENST00000476387 APOOQ9BUR5 198 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 CLPBQ9H078 707 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 RAI2Q9Y5P3 530 aa16.22■□□□□ 0.19
COL1A1-205ENST00000476387 BPTFQ12830 3046 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 A8MX80 341 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 KCNK1O00180 336 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 RECQL5O94762 991 aaPredicted RBP16.21■□□□□ 0.19
COL1A1-205ENST00000476387 MPOP05164 745 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 EPHB1P54762 984 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 PCBP4P57723 403 aaKnown RBP16.21■□□□□ 0.19
COL1A1-205ENST00000476387 ERVPABLB-1P60509 514 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 GABREP78334 506 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 DSC2Q02487 901 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 AP1B1Q10567 949 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 ARHGEF7Q14155 803 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 ALG11Q2TAA5 492 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 RAD9BQ6WBX8 426 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 RBM44Q6ZP01 1051 aaKnown RBP16.21■□□□□ 0.19
COL1A1-205ENST00000476387 KIAA1328Q86T90 577 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 CCDC50Q8IVM0 306 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 KATNAL2Q8IYT4 538 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 TXLNBQ8N3L3 684 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 ARL10Q8N8L6 244 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 SPC24Q8NBT2 197 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 CRELD1Q96HD1 420 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 HIC2Q96JB3 615 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 PRORYQ9H606 182 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 PADI4Q9UM07 663 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 DOLKQ9UPQ8 538 aa16.21■□□□□ 0.19
COL1A1-205ENST00000476387 JCHAINP01591 159 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms