RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 ERMARDQ5T6L9 678 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 SPECC1LQ69YQ0 1117 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 PLEKHA7Q6IQ23 1121 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 ARHGAP36Q6ZRI8 547 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 CLEC17AQ6ZS10 378 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 RFX8Q6ZV50 586 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 CYP4V2Q6ZWL3 525 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 APTXQ7Z2E3 356 aaKnown RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 IRF2BP2Q7Z5L9 587 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 SPRED1Q7Z699 444 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 TAF8Q7Z7C8 310 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 SFTPA2Q8IWL1 248 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 ARFGAP1Q8N6T3 406 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 NPWQ8N729 165 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 Q8N9G6 341 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 FAM46DQ8NEK8 389 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 TMEM159Q96B96 161 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 PEBP4Q96S96 227 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 KCTD15Q96SI1 283 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 SYT11Q9BT88 431 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 TMEM168Q9H0V1 697 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 WDR26Q9H7D7 661 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 SP110Q9HB58 689 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 MRPL40Q9NQ50 206 aaKnown RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 PARVAQ9NVD7 372 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 PCSK1NQ9UHG2 260 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 LOXL2Q9Y4K0 774 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 RNF215Q9Y6U7 377 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 TLN1Q9Y490 2541 aaKnown RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 PRSS38A1L453 326 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 B4DGG1 531 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 DFFAO00273 331 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 DAPK3O43293 454 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 HTRA2O43464 458 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 NUDT21O43809 227 aaKnown RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 MYCLP1P12525 358 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 ITIH1P19827 911 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 CDK11BP21127 795 aaKnown RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 TNFAIP3P21580 790 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 MIPP30301 263 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 HCAR3P49019 387 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 SCNN1BP51168 640 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 RENBPP51606 427 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 ZNF135P52742 658 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 AP1S1P61966 158 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 SRSF6Q13247 344 aaKnown RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 DPYSQ14117 519 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 ARHGEF7Q14155 803 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 ACOX1Q15067 660 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 TGIF1Q15583 401 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 STX1AQ16623 288 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 LINC00303Q3SY05 128 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 PPP6R3Q5H9R7 873 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 PNCKQ6P2M8 343 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 TMPRSS9Q7Z410 1059 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 ZNF438Q7Z4V0 828 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 PSTKQ8IV42 348 aaKnown RBP7.21□□□□□ -1.26
UBE4B-208ENST00000475795 SLITRK4Q8IW52 837 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 PELI3Q8N2H9 469 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 PAF1Q8N7H5 531 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 CCL4L1Q8NHW4 92 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 GPBAR1Q8TDU6 330 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 FNIP1Q8TF40 1166 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 NUS1Q96E22 293 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 SGF29Q96ES7 293 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 COQ10AQ96MF6 247 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 NSMCE3Q96MG7 304 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 ZNF599Q96NL3 588 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 PSKH2Q96QS6 385 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 LGR4Q9BXB1 951 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 HSD3B7Q9H2F3 369 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 DPEP2Q9H4A9 486 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 CYP4F12Q9HCS2 524 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 ANO10Q9NW15 660 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 LRIT1Q9P2V4 623 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 B4GALT6Q9UBX8 382 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 SEPT3Q9UH03 358 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 MYO6Q9UM54 1294 aa7.21□□□□□ -1.26
UBE4B-208ENST00000475795 PRAMEF33A0A0G2JMD5 474 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-208ENST00000475795 A0A1W2PQ67 120 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 TTC24A2A3L6 582 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-208ENST00000475795 TMEM191CA6NGB0 347 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 A8MX80 341 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 TMCO5BA8MYB1 307 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 C9orf172C9J069 976 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 PDE2AO00408 941 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-208ENST00000475795 TEX33O43247 280 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 SLC28A2O43868 658 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 PRPSAP2O60256 369 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 PRAMEF10O60809 474 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 SOCS5O75159 536 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 LRCH4O75427 683 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 RNF8O76064 485 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 ITGB2P05107 769 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 GZMAP12544 262 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 ATP1A3P13637 1013 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 CCNB1P14635 433 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 CR2P20023 1033 aa7.2□□□□□ -1.26
UBE4B-208ENST00000475795 CD82P27701 267 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms