RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 FBRSQ9HAH7 460 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 MAGEE1Q9HCI5 957 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 MOCS1Q9NZB8 636 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 NINJ2Q9NZG7 142 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 VPS18Q9P253 973 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 HECAQ9UBI9 543 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 EBF1Q9UH73 591 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 SOX13Q9UN79 622 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ERVW-1Q9UQF0 538 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 TTLL3Q9Y4R7 772 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 WNT6Q9Y6F9 365 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 FRYQ5TBA9 3013 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 IGF2RP11717 2491 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 EML5Q05BV3 1969 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ZNF638Q14966 1978 aaKnown RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 PCNX2A6NKB5 2137 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ABCA7Q8IZY2 2146 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 PTPRDP23468 1912 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 NUP205Q92621 2012 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 EXOC1LA0A1B0GW35 172 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TCRBV7S3A2A0A539 114 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 F8W8V4 182 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 GIPC1O14908 333 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 KHNYNO15037 678 aaKnown RBP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TULP3O75386 442 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 FAM155BO75949 473 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 WFS1O76024 890 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TMEM63AO94886 807 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 ACSL3O95573 720 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 APBB3O95704 486 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 PRNPP04156 253 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 CYP17A1P05093 508 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 INHBAP08476 426 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SRCP12931 536 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 HNRNPLP14866 589 aaKnown RBP eCLIP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 PRKCHP24723 683 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 CD70P32970 193 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 GRIA4P48058 902 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 RPIAP49247 311 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 IRAK1P51617 712 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SGSHP51688 502 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SLC18A1P54219 525 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 EPHB1P54762 984 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SESN2P58004 480 aaPredicted RBP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 FAM193AP78312 1265 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 MGAT5Q09328 741 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 NIPAL4Q0D2K0 466 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TAF1AQ15573 450 aaPredicted RBP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 DLG2Q15700 870 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 KRT71Q3SY84 523 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 ANKRD20A4Q4UJ75 823 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 GRTP1Q5TC63 336 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 EMC10Q5UCC4 262 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 FAM46CQ5VWP2 391 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TCEAL6Q6IPX3 200 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 KIAA0408Q6ZU52 694 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SYT13Q7L8C5 426 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 GALNT7Q86SF2 657 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 ADIPOR2Q86V24 386 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SLC26A11Q86WA9 606 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 ETFBKMTQ8IXQ9 262 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 APCDD1Q8J025 514 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 KRT222Q8N1A0 295 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 RYBPQ8N488 228 aaPredicted RBP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 CCDC33Q8N5R6 958 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 PAF1Q8N7H5 531 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TSEN2Q8NCE0 465 aaKnown RBP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TMIEQ8NEW7 156 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 IPMKQ8NFU5 416 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 OR52K1Q8NGK4 314 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 DTX3LQ8TDB6 740 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TCEAL3Q969E4 200 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 OXNAD1Q96HP4 312 aaPredicted RBP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 C9orf72Q96LT7 481 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 ZIM3Q96PE6 472 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TCF12Q99081 682 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 EBF3Q9H4W6 596 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 SUV39H2Q9H5I1 410 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 CNOT10Q9H9A5 744 aaKnown RBP7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TMBIM4Q9HC24 238 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 NOD2Q9HC29 1040 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 TMEM9BQ9NQ34 198 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 ZNF446Q9NWS9 450 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 FAM53CQ9NYF3 392 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 PLK2Q9NYY3 685 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 DKK3Q9UBP4 350 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 WASF3Q9UPY6 502 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 PPIL1Q9Y3C6 166 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 RAI2Q9Y5P3 530 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 NFS1Q9Y697 457 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 RPS6KL1Q9Y6S9 549 aa7.05□□□□□ -1.28
SHQ1-207ENST00000475558 ANKRD11Q6UB99 2663 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 THADAQ6YHU6 1953 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 GON4LQ3T8J9 2241 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 ASCC3Q8N3C0 2202 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 LAMA1P25391 3075 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 EDDM13A0A1B0GTR0 161 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 LNP1A1A4G5 178 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms