RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CPEB1Q9BZB8 566 aaKnown RBP15.74■□□□□ 0.11
CPSF3-203ENST00000475482 SLC39A8Q9C0K1 460 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 PAK5Q9P286 719 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 DKK3Q9UBP4 350 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 LHX3Q9UBR4 397 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 ANKRD36A6QL64 1941 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 ESYT3A0FGR9 886 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 TMEM8BA6NDV4 472 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 KCNN4O15554 427 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 UGT2B4P06133 528 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 AKT2P31751 481 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 CARSP49589 748 aaKnown RBP15.73■□□□□ 0.11
CPSF3-203ENST00000475482 GALNT2Q10471 571 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 BNIP3Q12983 259 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 TMPRSS7Q7RTY8 843 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 CCNYQ8ND76 341 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 HDAC11Q96DB2 347 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 RTP4Q96DX8 246 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 KLHL32Q96NJ5 620 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 LENG8Q96PV6 779 aaPredicted RBP15.73■□□□□ 0.11
CPSF3-203ENST00000475482 KLF6Q99612 283 aaPredicted RBP15.73■□□□□ 0.11
CPSF3-203ENST00000475482 FOXP3Q9BZS1 431 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 ETNK2Q9NVF9 386 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 NFU1Q9UMS0 254 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 SNX24Q9Y343 169 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 ACACAQ13085 2346 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 DMXL2Q8TDJ6 3036 aa15.73■□□□□ 0.11
CPSF3-203ENST00000475482 J3KR12 359 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 RAD51BO15315 384 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 ZZEF1O43149 2961 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 IGSF6O95976 241 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 THEGLP0DJG4 465 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 RPL21P46778 160 aaKnown RBP15.72■□□□□ 0.11
CPSF3-203ENST00000475482 RHOAP61586 193 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 AP1B1Q10567 949 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 SLC10A2Q12908 348 aaPredicted RBP15.72■□□□□ 0.11
CPSF3-203ENST00000475482 GPS1Q13098 491 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 TIGD7Q6NT04 549 aaPredicted RBP15.72■□□□□ 0.11
CPSF3-203ENST00000475482 GDPD4Q6W3E5 623 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 SLC22A18ASQ8N1D0 253 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 RYBPQ8N488 228 aaPredicted RBP15.72■□□□□ 0.11
CPSF3-203ENST00000475482 NPWQ8N729 165 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 FAM71DQ8N9W8 422 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 NETO2Q8NC67 525 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 OR13H1Q8NG92 308 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 HCAR2Q8TDS4 363 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 HTR3CQ8WXA8 447 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 IFT43Q96FT9 208 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 FMO2Q99518 471 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 FZD3Q9NPG1 666 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 UBA2Q9UBT2 640 aaPredicted RBP15.72■□□□□ 0.11
CPSF3-203ENST00000475482 ANAPC5Q9UJX4 755 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 PCDHGA1Q9Y5H4 931 aa15.72■□□□□ 0.11
CPSF3-203ENST00000475482 FREM2Q5SZK8 3169 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 APC2O95996 2303 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 TSPAN11A1L157 253 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 ARHGAP42A6NI28 874 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 INSIG1O15503 277 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 SEC31AO94979 1220 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 PAK4O96013 591 aaPredicted RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 TIMP2P16035 220 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 RBL1P28749 1068 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 GARSP41250 739 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 CSNK1DP48730 415 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 PAPOLAP51003 745 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 CLDN2P57739 230 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 RAD51Q06609 339 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 PPIDQ08752 370 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 PRKD1Q15139 912 aaPredicted RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 TRIP13Q15645 432 aaPredicted RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 KYAT3Q6YP21 454 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 ZNF354CQ86Y25 554 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 DCP2Q8IU60 420 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 ATPAF2Q8N5M1 289 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 DENND6BQ8NEG7 585 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 AENQ8WTP8 325 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 ART4Q93070 314 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 CAVIN3Q969G5 261 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 CELF6Q96J87 481 aaKnown RBP15.71■□□□□ 0.11
CPSF3-203ENST00000475482 VAT1Q99536 393 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 FTSJ1Q9UET6 329 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 GGT7Q9UJ14 662 aa15.71■□□□□ 0.11
CPSF3-203ENST00000475482 ANKRD11Q6UB99 2663 aaPredicted RBP15.7■□□□□ 0.1
CPSF3-203ENST00000475482 POM121BA6NF01 834 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 C5orf60A6NFR6 353 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 IGLON5A6NGN9 336 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 A6NNZ2 444 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 DNALI1O14645 258 aaPredicted RBP15.7■□□□□ 0.1
CPSF3-203ENST00000475482 ATP8B1O43520 1251 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 GCATO75600 419 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 CCNCP24863 283 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 VPS41P49754 854 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 SUOXP51687 545 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 PLTPP55058 493 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 MORF4L2Q15014 288 aa15.7■□□□□ 0.1
CPSF3-203ENST00000475482 SMAD1Q15797 465 aaKnown RBP15.7■□□□□ 0.1
CPSF3-203ENST00000475482 BEND6Q5SZJ8 279 aaPredicted RBP15.7■□□□□ 0.1
CPSF3-203ENST00000475482 IZUMO3Q5VZ72 239 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms