RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNF220-211ENST00000474956 LGI2Q8N0V4 545 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 BHLHE22Q8NFJ8 381 aaPredicted RBP12.48□□□□□ -0.41
RNF220-211ENST00000474956 BLOC1S5Q8TDH9 187 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 FBXO44Q9H4M3 255 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 TIMMDC1Q9NPL8 285 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 TMEM248Q9NWD8 314 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 HSFX1Q9UBD0 423 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 PCDHGB4Q9UN71 923 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 PCDHGB5Q9Y5G0 923 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 PRSS51A0A1B0GVH4 220 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 GRID2O43424 1007 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 TSPAN3O60637 253 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 CAPN15O75808 1086 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 ALDH2P05091 517 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 GALTP07902 379 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 SELPP16109 830 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 APOFQ13790 326 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 HERC3Q15034 1050 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 STON2Q8WXE9 905 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 LZICQ8WZA0 190 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 ITFG2Q969R8 447 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 RCN3Q96D15 328 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 PHF21BQ96EK2 531 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 DNAJC1Q96KC8 554 aaKnown RBP12.48□□□□□ -0.41
RNF220-211ENST00000474956 TBATAQ96M53 351 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 DRC3Q9H069 523 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 SLC25A51Q9H1U9 297 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 DOCK6Q96HP0 2047 aa12.48□□□□□ -0.41
RNF220-211ENST00000474956 TMEM189-UBE2V1I3L0A0 370 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 GPR39O43194 453 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 HNRNPRO43390 633 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 BCAS2O75934 225 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 ATXN1LP0C7T5 689 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 STMN1P16949 149 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 RHOQP17081 205 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 FGFR3P22607 806 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 PRKAA2P54646 552 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 CEACAM7Q14002 265 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 FRG1Q14331 258 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 ZYG11AQ6WRX3 759 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 LILRA2Q8N149 483 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 LZTR1Q8N653 840 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 C2CD4AQ8NCU7 369 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 PDCD6IPQ8WUM4 868 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 EXT2Q93063 718 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 FUBP3Q96I24 572 aaKnown RBP eCLIP12.47□□□□□ -0.41
RNF220-211ENST00000474956 C1orf74Q96LT6 269 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 WDR41Q9HAD4 459 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 EFCAB1Q9HAE3 211 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 ENTPD7Q9NQZ7 604 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 ACOT9Q9Y305 439 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 CFLARO15519 480 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 RAMP2O60895 175 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 KLKB1P03952 638 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 ENO3P13929 434 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 SERPINH1P50454 418 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 ZNF135P52742 658 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 ATXN3P54252 364 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 PKNOX1P55347 436 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 MS4A2Q01362 244 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 ART3Q13508 389 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 ISLR2Q6UXK2 745 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 C16orf59Q7L2K0 433 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 CNTN4Q8IWV2 1026 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 RDH11Q8TC12 318 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 STYXQ8WUJ0 223 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 AUTS2Q8WXX7 1259 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 BTN2A3PQ96KV6 586 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 CATSPER2Q96P56 530 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 PKP2Q99959 881 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 ZBED2Q9BTP6 218 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 SPON2Q9BUD6 331 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 IGSF5Q9NSI5 407 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 VTI1BQ9UEU0 232 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 CNOT11Q9UKZ1 510 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 GMEB1Q9Y692 573 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 LRRC14BA6NHZ5 514 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 SEC24AO95486 1093 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 OR1D2P34982 312 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 CD151P48509 253 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 HPCAP84074 193 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 PRKAA1Q13131 559 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 SLC12A1Q13621 1099 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 RFTN1Q14699 578 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 C6orf52Q5T4I8 152 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 LIPMQ5VYY2 423 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 TIGD7Q6NT04 549 aaPredicted RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 DENND1CQ8IV53 801 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 SLC43A3Q8NBI5 491 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 SLC45A3Q96JT2 553 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 MRPL1Q9BYD6 325 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 ZNF385DQ9H6B1 395 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 DDX18Q9NVP1 670 aaKnown RBP12.47□□□□□ -0.41
RNF220-211ENST00000474956 SMPD4Q9NXE4 827 aa12.47□□□□□ -0.41
RNF220-211ENST00000474956 IGLV3-10A0A075B6K4 115 aa12.46□□□□□ -0.41
RNF220-211ENST00000474956 MOXD2PA6NHM9 499 aa12.46□□□□□ -0.41
RNF220-211ENST00000474956 PPP6CO00743 305 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms