RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 KIF19Q2TAC6 998 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 LRRC66Q68CR7 880 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 DENND5AQ6IQ26 1287 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 ESRP1Q6NXG1 681 aaKnown RBP16.95■□□□□ 0.3
SCAF11-206ENST00000474828 C4orf22Q6V702 233 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 DBX2Q6ZNG2 339 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 HSD11B1LQ7Z5J1 315 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 TMC3Q7Z5M5 1100 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 SPATS2Q86XZ4 545 aaKnown RBP16.95■□□□□ 0.3
SCAF11-206ENST00000474828 NRSN1Q8IZ57 195 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 HINFPQ9BQA5 517 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 TRABDQ9H4I3 376 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 FZD3Q9NPG1 666 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 MBNL1Q9NR56 388 aaKnown RBP16.95■□□□□ 0.3
SCAF11-206ENST00000474828 UBP1Q9NZI7 540 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 NEU2Q9Y3R4 380 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 RALGAPA1Q6GYQ0 2036 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 CTAGE9A4FU28 777 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 ERI2A8K979 691 aaKnown RBP16.94■□□□□ 0.3
SCAF11-206ENST00000474828 H0Y8X5 98 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 FPGTO14772 594 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 ZNF185O15231 689 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 DFNA5O60443 496 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 SUN1O94901 812 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 FGF1P05230 155 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 RABIFP47224 123 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 RXRGP48443 463 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 EPHB1P54762 984 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 MTM1Q13496 603 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 SEMA5AQ13591 1074 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 GALNT3Q14435 633 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 PRPSAP1Q14558 356 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 SIRPB2Q5JXA9 342 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 ARHGEF18Q6ZSZ5 1173 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 ERMP1Q7Z2K6 904 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 SLC22A18ASQ8N1D0 253 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 C17orf53Q8N3J3 647 aaPredicted RBP16.94■□□□□ 0.3
SCAF11-206ENST00000474828 GLIS1Q8NBF1 620 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 DTX3LQ8TDB6 740 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 EDEM2Q9BV94 578 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 AASDHPPTQ9NRN7 309 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 RNF14Q9UBS8 474 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 FEZ2Q9UHY8 353 aaPredicted RBP16.94■□□□□ 0.3
SCAF11-206ENST00000474828 CA5BQ9Y2D0 317 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 COQ6Q9Y2Z9 468 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 SNX11Q9Y5W9 270 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 SAR1BQ9Y6B6 198 aa16.94■□□□□ 0.3
SCAF11-206ENST00000474828 SPTY2D1-AS1A0A0U1RR47 76 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 LZTS3O60299 673 aaPredicted RBP16.93■□□□□ 0.3
SCAF11-206ENST00000474828 GDF9O60383 454 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 AP2A1O95782 977 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 C1SP09871 688 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 CLDN2P57739 230 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 SLC14A1Q13336 389 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 SNX1Q13596 522 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 ARHGEF7Q14155 803 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 IRF4Q15306 451 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 PCSK7Q16549 785 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 HLA-BQ31612 363 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 TTC27Q6P3X3 843 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 LAYNQ6UX15 382 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 Q6ZVL8 140 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 KIAA2013Q8IYS2 634 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 TTC30BQ8N4P2 665 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 OR13H1Q8NG92 308 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 ATL2Q8NHH9 583 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 NETO1Q8TDF5 533 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 SLCO2A1Q92959 643 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 RMDN1Q96DB5 314 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 KLHDC7BQ96G42 594 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 CDH19Q9H159 772 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 HACD3Q9P035 362 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 PAK5Q9P286 719 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 PCDHGB2Q9Y5G2 931 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 SPO11Q9Y5K1 396 aa16.93■□□□□ 0.3
SCAF11-206ENST00000474828 BPTFQ12830 3046 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 A8MX80 341 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 PSMD3O43242 534 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 CLDN7O95471 211 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 CER1O95813 267 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 AGTP01019 485 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 THEGLP0DJG4 465 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 PSMA3P25788 255 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 RPL22P35268 128 aaKnown RBP16.92■□□□□ 0.3
SCAF11-206ENST00000474828 HMGCLP35914 325 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 FDFT1P37268 417 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 ETV3P41162 512 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 CHRNA4P43681 627 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 SPINT3P49223 89 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 FNTAP49354 379 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 DCDC1P59894 354 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 SHBQ15464 509 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 AASDHQ4L235 1098 aaPredicted RBP16.92■□□□□ 0.3
SCAF11-206ENST00000474828 STPG1Q5TH74 334 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 CCDC70Q6NSX1 233 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 Q6ZSR6 202 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 OXR1Q8N573 874 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 MINDY1Q8N5J2 469 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 PAF1Q8N7H5 531 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 IPMKQ8NFU5 416 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms