RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SNX17Q15036 470 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 POLD3Q15054 466 aaPredicted RBP18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 MFSD4BQ5TF39 518 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 SLCO6A1Q86UG4 719 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 IFNEQ86WN2 208 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 TBC1D21Q8IYX1 336 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 NAT16Q8N8M0 369 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 PDZD8Q8NEN9 1154 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 MRPL45Q9BRJ2 306 aaKnown RBP18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 RMND5AQ9H871 391 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 SPON1Q9HCB6 807 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 IFT52Q9Y366 437 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 NDUFAF1Q9Y375 327 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 NME7Q9Y5B8 376 aa18.64■□□□□ 0.57
ECHDC1-214ENST00000474289 ERI2A8K979 691 aaKnown RBP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 UBFD1O14562 309 aaKnown RBP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 ANGPT2O15123 496 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 IQCF3P0C7M6 154 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 CSHL1Q14406 222 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 CTF1Q16619 201 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 UGP2Q16851 508 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 MFSD4AQ8N468 514 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 MTMR14Q8NCE2 650 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 SLC22A17Q8WUG5 538 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 S100ZQ8WXG8 99 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 PHF21BQ96EK2 531 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 VMP1Q96GC9 406 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 ZBED3Q96IU2 234 aaPredicted RBP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 DHRS1Q96LJ7 313 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 POLE4Q9NR33 117 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 CHST12Q9NRB3 414 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 ANAPC2Q9UJX6 822 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 ANKRD12Q6UB98 2062 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 AXIN1O15169 862 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 TSPAN8P19075 237 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 NFKB1P19838 968 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 UBA1P22314 1058 aaKnown RBP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 SNX16P57768 344 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 SKIV2LQ15477 1246 aaKnown RBP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 TECRLQ5HYJ1 363 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 KRT27Q7Z3Y8 459 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 C7orf31Q8N865 590 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 LEMD2Q8NC56 503 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 PAPD5Q8NDF8 572 aaKnown RBP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 DNERQ8NFT8 737 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 LRRC58Q96CX6 371 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 ELMO2Q96JJ3 720 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 KIFC1Q9BW19 673 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 MRM3Q9HC36 420 aaKnown RBP18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 MAGEE1Q9HCI5 957 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 IGSF5Q9NSI5 407 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 TNFSF13BQ9Y275 285 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 V9GYQ6 96 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 SHROOM3Q8TF72 1996 aa18.63■□□□□ 0.57
ECHDC1-214ENST00000474289 RLFQ13129 1914 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 SYNJ2BP-COX16A0A087WUM0 186 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 DCLK1O15075 740 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 PEX10O60683 326 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 ZBTB7AO95365 584 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 MYL3P08590 195 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 HMGCS2P54868 508 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 BACE1P56817 501 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 PITX1P78337 314 aaPredicted RBP18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 PIGFQ07326 219 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 STXBP2Q15833 593 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 RNF135Q8IUD6 432 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 C19orf60Q96EN9 201 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 BTN2A3PQ96KV6 586 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 ZMAT2Q96NC0 199 aaKnown RBP18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 SEPHS2Q99611 448 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 IL12RB2Q99665 862 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 ACAD9Q9H845 621 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 COX16Q9P0S2 106 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 PCDHA9Q9Y5H5 950 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 NUP205Q92621 2012 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 AURKAO14965 403 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 FARP2O94887 1054 aaPredicted RBP18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 GSK3BP49841 420 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 SULT1E1P49888 294 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 IFITM2Q01629 132 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 CLCQ05315 142 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 CAMK2BQ13554 666 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 TMEM132DQ14C87 1099 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 DPY19L1Q2PZI1 675 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 SLC10A6Q3KNW5 377 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 RBM48Q5RL73 367 aaKnown RBP18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 CNTN4Q8IWV2 1026 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 Q8N9G6 341 aaPredicted RBP18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 ALG2Q9H553 416 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 AKTIPQ9H8T0 292 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 GIMAP2Q9UG22 337 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 BAG5Q9UL15 447 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 PCDHGA11Q9Y5H2 935 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 LCTP09848 1927 aa18.62■□□□□ 0.57
ECHDC1-214ENST00000474289 SCN1AP35498 2009 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 PSMD11O00231 422 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms