RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 DLDP09622 509 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 RALBP11234 206 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 COL6A2P12110 1019 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 PGM1P36871 562 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC1A6P48664 564 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 FLT3LGP49771 235 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 RENBPP51606 427 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 LIMK2P53671 638 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC5A3P53794 718 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 AQP5P55064 265 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 IRX4P78413 519 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 MGAT3Q09327 533 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SMARCB1Q12824 385 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 RCN2Q14257 317 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 E2F5Q15329 346 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ANKRD20A4Q4UJ75 823 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 NOMO2Q5JPE7 1267 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ADGRF1Q5T601 910 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 MAP3K21Q5TCX8 1036 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 OTUD1Q5VV17 481 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 CST9Q5W186 159 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ZNF280DQ6N043 979 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 KLC3Q6P597 504 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 TMEM135Q86UB9 458 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 MON1AQ86VX9 555 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 LSRQ86X29 649 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ZNF354CQ86Y25 554 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 TMPRSS6Q8IU80 811 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 CCDC117Q8IWD4 279 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SCN4BQ8IWT1 228 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 LMNTD2Q8IXW0 634 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 TEX9Q8N6V9 391 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 RTL3Q8N8U3 475 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SKA1Q96BD8 255 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 CMTM5Q96DZ9 223 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 TSPAN17Q96FV3 270 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SCYL1Q96KG9 808 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 TEKT5Q96M29 485 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 GLT1D1Q96MS3 346 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 FCRL5Q96RD9 977 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 NUDCD1Q96RS6 583 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 CDK5RAP1Q96SZ6 601 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 KCNK16Q96T55 309 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 TBC1D10AQ9BXI6 508 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SIK2Q9H0K1 926 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 VCX3BQ9H321 246 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 DCLRE1BQ9H816 532 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 RNPEPL1Q9HAU8 725 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 MRM3Q9HC36 420 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 BATF3Q9NR55 127 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SNX15Q9NRS6 342 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 COMMD8Q9NX08 183 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 DNAJC28Q9NX36 388 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ERVK13-1Q9NX77 482 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ARHGEF38Q9NXL2 777 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 NDE1Q9NXR1 346 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 BCAP29Q9UHQ4 241 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ANGPTL2Q9UKU9 493 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 GPR55Q9Y2T6 319 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 C15orf41Q9Y2V0 281 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 MFHAS1Q9Y4C4 1052 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SCN1AP35498 2009 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 PDCD11Q14690 1871 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 A0A087X1B8 175 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 A0A096LPK6 155 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 HEATR9A2RTY3 570 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 MYADML2A6NDP7 307 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 HHLA1C9JL84 531 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 H7C4K7 107 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 TMEM189-UBE2V1I3L0A0 370 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 HRKO00198 91 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 INPPL1O15357 1258 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 UGT1A9O60656 530 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 MAGEC1O60732 1142 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 TRIM13O60858 407 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 SNNO75324 88 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 TADA2AO75478 443 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 MOCS2O96007 188 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 ENO1P06733 434 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 ERVK-10P10266 1014 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 KITP10721 976 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 PNLIPP16233 465 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 HOXB8P17481 243 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 CRABP2P29373 138 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 GRIA1P42261 906 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 MAGEA11P43364 429 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 BRCC3P46736 316 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 TM4SF4P48230 202 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 TUBP50607 506 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 PAPOLAP51003 745 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 NDST2P52849 883 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 LINC00310P59036 64 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 ABCE1P61221 599 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 RPL10AP62906 217 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 PITX1P78337 314 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 CRADDP78560 199 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 OCRLQ01968 901 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 BFSP2Q13515 415 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC12A1Q13621 1099 aa5.93□□□□□ -1.46
ATPAF1-204ENST00000474020 ITGA7Q13683 1181 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms