RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PRAG1Q86YV5 1406 aa1.83□□□□□ -2.12
CCDC39-203ENST00000473854 CNTLNQ9NXG0 1405 aa1.83□□□□□ -2.12
CCDC39-203ENST00000473854 YEATS2Q9ULM3 1422 aa1.83□□□□□ -2.12
CCDC39-203ENST00000473854 MLH3Q9UHC1 1453 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 MAP2P11137 1827 aaKnown RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 ADGRB1O14514 1584 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 SPATA31D1Q6ZQQ2 1576 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 SETBP1Q9Y6X0 1596 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GOLGA6CA6NDK9 693 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GOLGA6BA6NDN3 693 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 KIF28PB7ZC32 967 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GRM8O00222 908 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 PRKNO60260 465 aaPredicted RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 ZIC3O60481 467 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 ZNF821O75541 412 aaPredicted RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GOLGA6DP0CG33 693 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 CYP4B1P13584 511 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 HLA-DOBP13765 273 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 ACADSP16219 412 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 CTPS1P17812 591 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GATA2P23769 480 aaPredicted RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GPTP24298 496 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 HOXC8P31273 242 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 TMPOP42166 694 aaKnown RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 RPS6KA3P51812 740 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 EFNA5P52803 228 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 MLLT10P55197 1068 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 RUNX1T1Q06455 604 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 CAPSQ13938 189 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GFOD2Q3B7J2 385 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 SCN4BQ8IWT1 228 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 BMPERQ8N8U9 685 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 TRIM58Q8NG06 486 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 BBS10Q8TAM1 723 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 KLHL29Q96CT2 875 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 STAMBPL1Q96FJ0 436 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 ST6GAL2Q96JF0 529 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GDF15Q99988 308 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 UPF2Q9HAU5 1272 aaKnown RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 WDR6Q9NNW5 1121 aaKnown RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 GOLGA6AQ9NYA3 693 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 C1RLQ9NZP8 487 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.82□□□□□ -2.12
CCDC39-203ENST00000473854 UPB1Q9UBR1 384 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 EID1Q9Y6B2 187 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 PTPRTO14522 1441 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 NPATQ14207 1427 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 CD109Q6YHK3 1445 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 SCAPERQ9BY12 1400 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 TAF1P21675 1872 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 MYOM2P54296 1465 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 NRXN1Q9ULB1 1477 aa1.82□□□□□ -2.12
CCDC39-203ENST00000473854 NRKQ7Z2Y5 1582 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 NALCNQ8IZF0 1738 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 FAM234BA2RU67 622 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 PLEKHD1A6NEE1 506 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 NPIPB5A8MRT5 1133 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 NPIPB4C9JG80 1138 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 APOL1O14791 398 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 SYN3O14994 580 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 DUX4L4P0CJ87 422 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 TFPIP10646 304 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 CD58P19256 250 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 SHC1P29353 583 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 AKT1P31749 480 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 DCTP40126 519 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 STT3AP46977 705 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 PLEKHG6Q3KR16 790 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 ARL13BQ3SXY8 428 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 ZNF613Q6PF04 617 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 GFRALQ6UXV0 394 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 MYO1HQ8N1T3 1032 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 TXLNBQ8N3L3 684 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 RNF152Q8N8N0 203 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 ARRDC2Q8TBH0 407 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 C2CD4CQ8TF44 421 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 KCNJ9Q92806 393 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 C17orf75Q9HAS0 396 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 SPATS2LQ9NUQ6 558 aaKnown RBP1.81□□□□□ -2.12
CCDC39-203ENST00000473854 OBP2AQ9NY56 170 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 MAP3K20Q9NYL2 800 aaKnown RBP1.81□□□□□ -2.12
CCDC39-203ENST00000473854 TCEAL9Q9UHQ7 104 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 RASAL2Q9UJF2 1139 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 CDC14AQ9UNH5 594 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 AMDHD2Q9Y303 409 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 PSAT1Q9Y617 370 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 NUP155O75694 1391 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 GPRASP1Q5JY77 1395 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 USP47Q96K76 1375 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 CCDC7Q96M83 1385 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 CCDC144AA2RUR9 1427 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 AGLP35573 1532 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 TULP4Q9NRJ4 1543 aa1.81□□□□□ -2.12
CCDC39-203ENST00000473854 XRN1Q8IZH2 1706 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 CHD2O14647 1828 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 XIRP1Q702N8 1843 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 PCNX3Q9H6A9 2034 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 OR6C68A6NDL8 312 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 HMX3A6NHT5 357 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms