RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SPATA6LQ8N4H0 392 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 POU5F2Q8N7G0 328 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 PNPLA1Q8N8W4 532 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 OR7D4Q8NG98 312 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 GABPB2Q8TAK5 448 aaPredicted RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 SHKBP1Q8TBC3 707 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 FAM45AQ8TCE6 357 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 BRSK1Q8TDC3 778 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ACTRT2Q8TDY3 377 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 SH3RF2Q8TEC5 729 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ANKRD49Q8WVL7 239 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 NRG4Q8WWG1 115 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 BADQ92934 168 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 HDAC10Q969S8 669 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 TRIM43Q96BQ3 446 aaPredicted RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 CMTM5Q96DZ9 223 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 TSPAN17Q96FV3 270 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 TRMT2BQ96GJ1 504 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 IGSF21Q96ID5 467 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 CLPTM1LQ96KA5 538 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 SCYL1Q96KG9 808 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 PSKH2Q96QS6 385 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 CLSTN3Q9BQT9 956 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 THTPAQ9BU02 230 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 OSBPL1AQ9BXW6 950 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 RC3H2Q9HBD1 1191 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 GPAMQ9HCL2 828 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 TCF7L2Q9NQB0 619 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ACSS2Q9NR19 701 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 MAN1C1Q9NR34 630 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.43□□□□□ -1.383e-6■■■■□ 19.7
SPEN-204ENST00000471538 STX18Q9P2W9 335 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 VTI1BQ9UEU0 232 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 AFF4Q9UHB7 1163 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 STOML2Q9UJZ1 356 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 CORO1CQ9ULV4 474 aaPredicted RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 FCF1Q9Y324 198 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 MTF2Q9Y483 593 aaPredicted RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 KCTD3Q9Y597 815 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ACTL7AQ9Y615 435 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ZFP37Q9Y6Q3 630 aaPredicted RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 OBSL1O75147 1896 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 MUC6Q6W4X9 2439 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ILVBLA1L0T0 632 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CCDC162PA2VCL2 907 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 NEMP2A6NFY4 417 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 E9PBE3 544 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CCL22O00626 93 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 SDHDO14521 159 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 DCXO43602 365 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 KLHL41O60662 606 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 PQBP1O60828 265 aaKnown RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 TBX10O75333 385 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CLDN11O75508 207 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 RPP40O75818 363 aaKnown RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 NDST3O95803 873 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CD160O95971 181 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 GOT2P00505 430 aaKnown RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 PENKP01210 267 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 PRLP01236 227 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 SOD2P04179 222 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CLTBP09497 229 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 COX4I1P13073 169 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 OGNP20774 298 aaKnown RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 SP100P23497 879 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 PIK3R1P27986 724 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 ADSLP30566 484 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 OR1D2P34982 312 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 SLC11A2P49281 568 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 ZNF140P52738 457 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 RPS24P62847 133 aaKnown RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 NFKB2Q00653 900 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 SLC34A1Q06495 639 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 SULT2A1Q06520 285 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 GALNT1Q10472 559 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 ASPHQ12797 758 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CSHL1Q14406 222 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 GALNT3Q14435 633 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 ZNF235Q14590 738 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 RFTN1Q14699 578 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 HERC3Q15034 1050 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 ACAP2Q15057 778 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CYTH1Q15438 398 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 FAM83EQ2M2I3 478 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 TYSND1Q2T9J0 566 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 FSCBQ5H9T9 825 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 RALGPS1Q5JS13 557 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 HECTD3Q5T447 861 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 AGAP9Q5VTM2 703 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 CXorf57Q6NSI4 855 aaKnown RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 RIPOR1Q6ZS17 1223 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 FRMD7Q6ZUT3 714 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 PTAR1Q7Z6K3 402 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 SETD3Q86TU7 594 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 LDB1Q86U70 411 aaPredicted RBP6.42□□□□□ -1.38
SPEN-204ENST00000471538 ZNF354CQ86Y25 554 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 PELI3Q8N2H9 469 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 MAB21L3Q8N8X9 362 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 OR13C4Q8NGS5 318 aa6.42□□□□□ -1.38
SPEN-204ENST00000471538 SCG3Q8WXD2 468 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms