RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 MMP13P45452 471 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 AGERQ15109 404 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 MARC1Q5VT66 337 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 PARGQ86W56 976 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 PGBD5Q8N414 524 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 TEX26Q8N6G2 289 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 TP53I13Q8NBR0 393 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-203ENST00000468565 FATE1Q969F0 183 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 TMEM121BQ9BXQ6 578 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-203ENST00000468565 PCDHGA1Q9Y5H4 931 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 HTRA2O43464 458 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-203ENST00000468565 SDC3O75056 442 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 PIAS2O75928 621 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 FGGP02679 453 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 SLC1A1P43005 524 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 YPEL5P62699 121 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 PDE1CQ14123 709 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-203ENST00000468565 PTK2BQ14289 1009 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 FZD2Q14332 565 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 HLTFQ14527 1009 aaKnown RBP eCLIP14.53□□□□□ -0.082e-8■□□□□ 11.3
COL27A1-203ENST00000468565 LRRC38Q5VT99 294 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-203ENST00000468565 UNQ6494/PRO21346Q6UXR6 183 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 NSMCE3Q96MG7 304 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 SH3GL2Q99962 352 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 ALG6Q9Y672 507 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 CSF2P04141 144 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 CDK4P11802 303 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 C6P13671 934 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 NME1P15531 152 aaKnown RBP14.53□□□□□ -0.08
COL27A1-203ENST00000468565 DGKAP23743 735 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 HNRNPKP61978 463 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL27A1-203ENST00000468565 ZFYVE27Q5T4F4 411 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 DPPA4Q7L190 304 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 SLC25A45Q8N413 288 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 PQLC3Q8N755 202 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 FAM76AQ8TAV0 307 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 RAPGEF5Q92565 580 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 MAML1Q92585 1016 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 GATA6Q92908 595 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 TSGA13Q96PP4 275 aa14.53□□□□□ -0.08
COL27A1-203ENST00000468565 DDX47Q9H0S4 455 aaKnown RBP14.53□□□□□ -0.08
COL27A1-203ENST00000468565 MYLKQ15746 1914 aa14.52□□□□□ -0.08
COL27A1-203ENST00000468565 GOLGA6CA6NDK9 693 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 H3BM21 787 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 C1SP09871 688 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 FAM153BP0C7A2 387 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 MX2P20592 715 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 CCNCP24863 283 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 LIG3P49916 1009 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 THOP1P52888 689 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 RALGDSQ12967 914 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 LRRC14Q15048 493 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 IRF4Q15306 451 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 FAM153CQ494X1 144 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 TMPRSS7Q7RTY8 843 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 PAF1Q8N7H5 531 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 OR4C6Q8NH72 309 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 RNF157Q96PX1 679 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 MBNL1Q9NR56 388 aaKnown RBP14.52□□□□□ -0.09
COL27A1-203ENST00000468565 DNAJC28Q9NX36 388 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 AMACRQ9UHK6 382 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 FAM153AQ9UHL3 310 aa14.52□□□□□ -0.09
COL27A1-203ENST00000468565 KNTC1P50748 2209 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 LRRD1A4D1F6 860 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 GOLGA8CPA6NN73 597 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 BHMG1C9JSJ3 638 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-203ENST00000468565 MATN3O15232 486 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 PRKCGP05129 697 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 PROS1P07225 676 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 NFKBIAP25963 317 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 MAXP61244 160 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 ZNF211Q13398 564 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-203ENST00000468565 PROX2Q3B8N5 592 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 TPRG1LQ5T0D9 272 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 ALG1LQ6GMV1 187 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 HDAC11Q96DB2 347 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 POLR1EQ9GZS1 481 aaKnown RBP14.51□□□□□ -0.09
COL27A1-203ENST00000468565 NOD2Q9HC29 1040 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 FAM114A2Q9NRY5 505 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 HAUS2Q9NVX0 235 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 UCKL1Q9NWZ5 548 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 COQ6Q9Y2Z9 468 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 UTP11Q9Y3A2 253 aaKnown RBP14.51□□□□□ -0.09
COL27A1-203ENST00000468565 PCDHGC4Q9Y5F7 938 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 TTC24A2A3L6 582 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-203ENST00000468565 TMEM8BA6NDV4 472 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 NEMP2A6NFY4 417 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 C3orf70A6NLC5 250 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-203ENST00000468565 C1QTNF9BB2RNN3 333 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 LZTS3O60299 673 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-203ENST00000468565 RFPL3O75679 317 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 CPP00450 1065 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 C1QTNF9P0C862 333 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 CES1P23141 567 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 ACADVLP49748 655 aa14.51□□□□□ -0.09
COL27A1-203ENST00000468565 PEX5P50542 639 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms