RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 ESX1Q8N693 406 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 ANKRD52Q8NB46 1076 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 ATP11CQ8NB49 1132 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 XXYLT1Q8NBI6 393 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 TP53I13Q8NBR0 393 aaPredicted RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 DENND6BQ8NEG7 585 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 RASSF8Q8NHQ8 419 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 CCL4L1Q8NHW4 92 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 SPATA3Q8NHX4 192 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 PARD3BQ8TEW8 1205 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 RNF166Q96A37 237 aaPredicted RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 PNPLA2Q96AD5 504 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 SLC39A13Q96H72 371 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 EPSTI1Q96J88 318 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 TEFMQ96QE5 360 aaKnown RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 RBM15Q96T37 977 aaKnown RBP eCLIP4.28□□□□□ -1.72
CPS1-205ENST00000467353 MUC3BQ9H195 1237 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 TRIT1Q9H3H1 467 aaKnown RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 DPEP2Q9H4A9 486 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 ZSCAN16Q9H4T2 348 aaPredicted RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 FBXO8Q9NRD0 319 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 ABCC13Q9NSE7 274 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 SPATS2LQ9NUQ6 558 aaKnown RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 PANK4Q9NVE7 773 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 PDP2Q9P2J9 529 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 IL36AQ9UHA7 158 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 SLC25A13Q9UJS0 675 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 OSGIN2Q9Y236 505 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 HS3ST2Q9Y278 367 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 NTNG1Q9Y2I2 539 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 ZNF451Q9Y4E5 1061 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 PCDHGA9Q9Y5G4 932 aaKnown RBP4.28□□□□□ -1.72
CPS1-205ENST00000467353 COMMD10Q9Y6G5 202 aa4.28□□□□□ -1.72
CPS1-205ENST00000467353 SVILO95425 2214 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 SHANK1Q9Y566 2161 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 IGHV1OR21-1A0A087WYE8 117 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 TRAV20A0A0B4J274 112 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 A6NCN8 305 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 GOLGA6CA6NDK9 693 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 GOLGA6BA6NDN3 693 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 ARGFXA6NJG6 315 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 TMEM200CA6NKL6 621 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 FIGNL2A6NMB9 653 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 TMEM110-MUSTN1A8MSY1 372 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 RHPN2P1A8MT19 583 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 B2RBV5 119 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 PIK3R2O00459 728 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 NEMP1O14524 444 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 PPM1DO15297 605 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 INPP4BO15327 924 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 MAN1A2O60476 641 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 SNAP91O60641 907 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 DPM1O60762 260 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 CEACAM4O75871 244 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 TNFP01375 233 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 RPN1P04843 607 aaKnown RBP4.27□□□□□ -1.73
CPS1-205ENST00000467353 GOLGA6DP0CG33 693 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 LCP1P13796 627 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 CAPN3P20807 821 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 RRM1P23921 792 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 HTR1EP28566 365 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 FLT3P36888 993 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 PEX5P50542 639 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 AP3M2P53677 418 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 RAD23BP54727 409 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 DAOAP59103 153 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 NUCB2P80303 420 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 TNP2Q05952 138 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 NR1D2Q14995 579 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 WSCD2Q2TBF2 565 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 ZACNQ401N2 412 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 ZC3H12AQ5D1E8 599 aaKnown RBP4.27□□□□□ -1.73
CPS1-205ENST00000467353 RILPL1Q5EBL4 403 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 WIPI1Q5MNZ9 446 aaPredicted RBP4.27□□□□□ -1.73
CPS1-205ENST00000467353 C1orf220Q5T0J3 134 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 ARHGAP17Q68EM7 881 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 PPP4R4Q6NUP7 873 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 TMEM71Q6P5X7 295 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 EPM2AIP1Q7L775 607 aaPredicted RBP4.27□□□□□ -1.73
CPS1-205ENST00000467353 NLRC3Q7RTR2 1065 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 SLC47A2Q86VL8 602 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 THNSL2Q86YJ6 484 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 IRF2BP1Q8IU81 584 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 FAM186BQ8IYM0 893 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 SLC4A11Q8NBS3 891 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 GALNT6Q8NCL4 622 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 UBA3Q8TBC4 463 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 ZNF507Q8TCN5 953 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 CLEC4CQ8WTT0 213 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 OR1E3Q8WZA6 343 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 TAF4BQ92750 862 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 HPS1Q92902 700 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 GAL3ST3Q96A11 431 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 VOPP1Q96AW1 172 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 PDXPQ96GD0 296 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 RUFY1Q96T51 708 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 PSMB7Q99436 277 aa4.27□□□□□ -1.73
CPS1-205ENST00000467353 PRMT1Q99873 361 aaKnown RBP4.27□□□□□ -1.73
CPS1-205ENST00000467353 SPOCK3Q9BQ16 436 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms